Gene Francci3_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1126 
Symbol 
ID3905468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1339488 
End bp1340705 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content72% 
IMG OID637878458 
Productlanthionine synthetase C-like 
Protein accessionYP_480235 
Protein GI86739835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCT GCGATCAGGC CGCCGCCACC GCAGCAAGCC TTGCCACCCG CCTCACCGTC 
CCATCCCCCA GAGAACTCGG GCAGACTGCG CAGTCGCTCG CCGACGGAGC GGCCGGCATC
GCCCTCCTGC ACGCCGAGCG AGCGCACGCC AGCGCCGAGC GCTGGGAGCC CGTCCAGGCG
TGGCTGACCG CAGCCATCTC CGGCCACCTC AGCGTGGCGA TGAACAGCTC GCTCTACGCC
GGCGCCCCGG CGGTCGCCTT CGCCGTTCAC ATCGCAGCCG GGCAGACCCG CCGCTACACC
GCCGCCCGCA CCGCGCTCGA TCAGGCCGTC GCCACCATCG CCCACCGCCT CGTCGACGCC
GCCAACGCCC GCATCGACCA GGGGGAACCG GGACGGTTCA CCGAGTACGA CGTCATCAGC
GGGCTCACCG GCATTGGCGC CCACCTCCTC GCCCACACCC CCGGCGACGA CGCCCTCGGC
CGCATCCTCA CCTACCTCGT CCGCCTCACC ACACCTCTCA ACCTCGACGG AGAGGAACTC
CCCGGCTGGT GGTGCAGCCA CGACCCGTCC CAGGGCAACA CTGCCGAATT CGCCGGTGGA
CACGCCAACC TCGGCATGGC CCACGGCGCC GCCGGCCCAC TGGCCCTGCT CTCGCTCGCC
ACACGCGCCG GGATACGCGT CCACGGCCAG ACCAACGCCA TCAACGCGCT GTGCGCCTTC
TATGACCAAT GGCGCCACGA CTCCCCCAGC GGTCCGTCCT GGCCACAGTG GATCACCCGT
GCCGATCAGC AGGCCGCGAG ACCGGCCCAG CCCGGCCCCG CCCGTCCGAG CTGGTGCTAT
GGCACCCCCG GAATCGCCCG CGCCCTCCAA CTCGCCGGCA TCGCCACCGG TGACACCACC
CGCCAGAACG CCGCCGAACA GGCACTCGCA GCCTGCCTCA CCGACTCCAC CCAACTCGCC
CACCTCACCG AAGCCGGACT GTGCCACGGA TGGGCAGGCC TCTACCAAAC CGTCGCCCGC
GCCGCCGCCG ACGCCACCAC CGAGACCCTC AGCCGCCACC TGCCGACACT CGCCGCTTCC
CTCCTGCTCT GCGCCCTTTC GAGCAGCGGG CGGGCTGATG GGCTCCTCGA AGGAGACGCC
GGCATCGCCC TCGTCCTCCA CAGCGTCGCC ACCGGCGCAC CGGCCACCGG ATGGGACAGA
TGCCTGCTGA TCCACTGA
 
Protein sequence
MIACDQAAAT AASLATRLTV PSPRELGQTA QSLADGAAGI ALLHAERAHA SAERWEPVQA 
WLTAAISGHL SVAMNSSLYA GAPAVAFAVH IAAGQTRRYT AARTALDQAV ATIAHRLVDA
ANARIDQGEP GRFTEYDVIS GLTGIGAHLL AHTPGDDALG RILTYLVRLT TPLNLDGEEL
PGWWCSHDPS QGNTAEFAGG HANLGMAHGA AGPLALLSLA TRAGIRVHGQ TNAINALCAF
YDQWRHDSPS GPSWPQWITR ADQQAARPAQ PGPARPSWCY GTPGIARALQ LAGIATGDTT
RQNAAEQALA ACLTDSTQLA HLTEAGLCHG WAGLYQTVAR AAADATTETL SRHLPTLAAS
LLLCALSSSG RADGLLEGDA GIALVLHSVA TGAPATGWDR CLLIH