Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1126 |
Symbol | |
ID | 3905468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1339488 |
End bp | 1340705 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878458 |
Product | lanthionine synthetase C-like |
Protein accession | YP_480235 |
Protein GI | 86739835 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCT GCGATCAGGC CGCCGCCACC GCAGCAAGCC TTGCCACCCG CCTCACCGTC CCATCCCCCA GAGAACTCGG GCAGACTGCG CAGTCGCTCG CCGACGGAGC GGCCGGCATC GCCCTCCTGC ACGCCGAGCG AGCGCACGCC AGCGCCGAGC GCTGGGAGCC CGTCCAGGCG TGGCTGACCG CAGCCATCTC CGGCCACCTC AGCGTGGCGA TGAACAGCTC GCTCTACGCC GGCGCCCCGG CGGTCGCCTT CGCCGTTCAC ATCGCAGCCG GGCAGACCCG CCGCTACACC GCCGCCCGCA CCGCGCTCGA TCAGGCCGTC GCCACCATCG CCCACCGCCT CGTCGACGCC GCCAACGCCC GCATCGACCA GGGGGAACCG GGACGGTTCA CCGAGTACGA CGTCATCAGC GGGCTCACCG GCATTGGCGC CCACCTCCTC GCCCACACCC CCGGCGACGA CGCCCTCGGC CGCATCCTCA CCTACCTCGT CCGCCTCACC ACACCTCTCA ACCTCGACGG AGAGGAACTC CCCGGCTGGT GGTGCAGCCA CGACCCGTCC CAGGGCAACA CTGCCGAATT CGCCGGTGGA CACGCCAACC TCGGCATGGC CCACGGCGCC GCCGGCCCAC TGGCCCTGCT CTCGCTCGCC ACACGCGCCG GGATACGCGT CCACGGCCAG ACCAACGCCA TCAACGCGCT GTGCGCCTTC TATGACCAAT GGCGCCACGA CTCCCCCAGC GGTCCGTCCT GGCCACAGTG GATCACCCGT GCCGATCAGC AGGCCGCGAG ACCGGCCCAG CCCGGCCCCG CCCGTCCGAG CTGGTGCTAT GGCACCCCCG GAATCGCCCG CGCCCTCCAA CTCGCCGGCA TCGCCACCGG TGACACCACC CGCCAGAACG CCGCCGAACA GGCACTCGCA GCCTGCCTCA CCGACTCCAC CCAACTCGCC CACCTCACCG AAGCCGGACT GTGCCACGGA TGGGCAGGCC TCTACCAAAC CGTCGCCCGC GCCGCCGCCG ACGCCACCAC CGAGACCCTC AGCCGCCACC TGCCGACACT CGCCGCTTCC CTCCTGCTCT GCGCCCTTTC GAGCAGCGGG CGGGCTGATG GGCTCCTCGA AGGAGACGCC GGCATCGCCC TCGTCCTCCA CAGCGTCGCC ACCGGCGCAC CGGCCACCGG ATGGGACAGA TGCCTGCTGA TCCACTGA
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Protein sequence | MIACDQAAAT AASLATRLTV PSPRELGQTA QSLADGAAGI ALLHAERAHA SAERWEPVQA WLTAAISGHL SVAMNSSLYA GAPAVAFAVH IAAGQTRRYT AARTALDQAV ATIAHRLVDA ANARIDQGEP GRFTEYDVIS GLTGIGAHLL AHTPGDDALG RILTYLVRLT TPLNLDGEEL PGWWCSHDPS QGNTAEFAGG HANLGMAHGA AGPLALLSLA TRAGIRVHGQ TNAINALCAF YDQWRHDSPS GPSWPQWITR ADQQAARPAQ PGPARPSWCY GTPGIARALQ LAGIATGDTT RQNAAEQALA ACLTDSTQLA HLTEAGLCHG WAGLYQTVAR AAADATTETL SRHLPTLAAS LLLCALSSSG RADGLLEGDA GIALVLHSVA TGAPATGWDR CLLIH
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