Gene Francci3_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1058 
Symbol 
ID3905304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1260690 
End bp1260872 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content66% 
IMG OID637878392 
Producthypothetical protein 
Protein accessionYP_480169 
Protein GI86739769 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.657355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.784499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG AACCCGAACT GTTGAAGATC CTCGCCTGCC CGGTCGACAA GGGACCGCTG 
GAGCTCGTCG ACGGCTGGCT GGTCAACCCG CGTCTCGGCC ATCGCTACGA GATCCGCGAC
GACGTTCCGA TCCTGCTCAG GCCGGATCAC GTCGACCCGG CCGTGGCACG CTCCTCGTCC
TGA
 
Protein sequence
MTIEPELLKI LACPVDKGPL ELVDGWLVNP RLGHRYEIRD DVPILLRPDH VDPAVARSSS