Gene Francci3_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0999 
Symbol 
ID3906685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1188603 
End bp1189940 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content64% 
IMG OID637878332 
Productcrotonyl-CoA reductase 
Protein accessionYP_480111 
Protein GI86739711 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR01751] crotonyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGAAA TAAGGTCAGC TATTCTCGCC GGTGACACGC CCAAGGAGGC CTTTACATCC 
CTCCGGGTGC CGGAGACCTA CCGGGGAGTG GTCGTCCGAA AGGAAGACGT CAACATTTTC
AGTGGGCTCG CATCCCGCGA CAAAGACCCC CGACGTTCAC TGCACCTGGA CGAGGTCGCG
ACACCGGAGA TCGGCCCCGG TGAGGCGCTG GTCGCCGTGA TGGCGTCCTC GATCAACTAC
AACACGGTGT GGACGTCGGT CTTCGAACCC CTGCCGACGT TCGGTTTCCT GGAGCGCTAC
GGCCGTCTCT CCCCGCTCAG CAAGCGACAC GACCTGCCTT ATCACGTCGT AGGGTCCGAT
CTCGCCGGTG TCGTGCTGCG CACTGGGCCG GGGGTACACG CCTGGTCGCC AGGTGACGAG
GTGGTGGCCC ACTGCCTGTC GGTCGAGCTG GAACGGCCGG AGGGCCACAA CGACACGATA
CTGGATCCGG AGCAGCGCAT CTGGGGTTTC GAGACCAACT TCGGTGGCCT CGCCGAACTG
GCTCTGGTCA AGGCGAACCA GCTCATGCCG AAACCGGCGC ATCTGAGCTG GGAGGAGGCC
GCGGCATCGG GCCTGGTGAA CTCCACCGCA TACCGTCAGC TGGTGTCGCG CAACGGCGCG
GACATGAAGC AGGGAGATAT CGTGCTGATC TGGGGCGCGA GCGGGGGTCT GGGCTCCTAC
GCCACGCAGC TGGCGGTGCG CGGCGGTGCC ATCCCAGTCT GCGTTGTCTC TTCTTCCGAG
AAAGCCGAAA TTGCCCACAG GATGGGCGCC GAGCTGGTGA TCGACCGGAC GTCGGAAGGC
TACCGGTTCT GGACGGATGA GCACACCCAG AACCCGAAGG AATGGCAGCG CTTTGGCAAG
AAGATCCGGC AGCTCACCGG CGGGGAGGAT CCGGACATCG TTTTCGAGCA TCCCGGACAG
GAGACCTTCG GCGCCTCGGT CTATGTGGCC CGCCGCGGCG GAACGATCGT CACCTGCGCC
TCCACCAGCG GCTTCGTCCA CTCCTACGAC AACCGCTATC TCTGGATGAA TCTGAAAAAG
ATAGTGGGGT CGCATTTCGC GAACTACCGC GAGGCCTGGG AGGCCAACCG ATTGATCACC
AAGGGGCTGG TTCATCCGAC CGTGTCACGG GTGTATCCAC TGGACGAGAC CGGCCAGGCC
GTCTACGAGG TGCACCGCAA CCTGCACCAG GGCAAGGTCG CGGTCCTGTG CCTCGCGCCG
CAGGAGGGCC TCGGCGTGCG CGACAACGCG ATACGGACCC GCCATCTGGA AGCGATCAAC
CGCTTCCGCG AGACGTGA
 
Protein sequence
MKEIRSAILA GDTPKEAFTS LRVPETYRGV VVRKEDVNIF SGLASRDKDP RRSLHLDEVA 
TPEIGPGEAL VAVMASSINY NTVWTSVFEP LPTFGFLERY GRLSPLSKRH DLPYHVVGSD
LAGVVLRTGP GVHAWSPGDE VVAHCLSVEL ERPEGHNDTI LDPEQRIWGF ETNFGGLAEL
ALVKANQLMP KPAHLSWEEA AASGLVNSTA YRQLVSRNGA DMKQGDIVLI WGASGGLGSY
ATQLAVRGGA IPVCVVSSSE KAEIAHRMGA ELVIDRTSEG YRFWTDEHTQ NPKEWQRFGK
KIRQLTGGED PDIVFEHPGQ ETFGASVYVA RRGGTIVTCA STSGFVHSYD NRYLWMNLKK
IVGSHFANYR EAWEANRLIT KGLVHPTVSR VYPLDETGQA VYEVHRNLHQ GKVAVLCLAP
QEGLGVRDNA IRTRHLEAIN RFRET