Gene Francci3_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0960 
Symbol 
ID3903867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1132888 
End bp1133736 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID637878294 
Producthypothetical protein 
Protein accessionYP_480073 
Protein GI86739673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.55535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.524457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA CATACACCGC CGAGCTGCCC TTCGGCGATC ACACCGTCTT CCGCCTGGCC 
GGACTGTTGG TCGCGGAGCG TCAGCGTCGT GGTACCCGTA ACGGCACTCG CACGCTGTCC
GCGCTGGAGC AGGCCGTGAT GGCCCTGCGC TGGTTCTGTG ACGGCACGCG GACCCGCCCG
CCCCTCAACG ATCATGGAGT ATCCCGCTCA GTGGGCTACC GCTACCTGCA CGAGGGCGTC
GCCGTGCTGG CCTGGCAGGC CCCTGACCTG CGCGAGGCGT TGATGCGGGC CAGGATCGCA
GGCTATCGCC ATCTGATCGT CGATGGCACG GTCATCGAGA CCGACCGGCT GCGCGTGCCT
GGTCCGAGCG AGGGCGTGGA CCTGTGGTGG TCCGGCAAGA TCTCCGATCA CGGTGGCAAC
GTCCAAATCC TGTCGACCCC CGACGACGGC TGGCCGCTGT GGGTCTCGGA GGTGCCCCCC
GGCCGCGAAC ACGACTCGAC CGCTCTGCGC GCCTCCGGCG CGCCGCCGAT CCTGGAAGAG
GAGTGGACCG CCGACCTACA CGAGGTGCTG TTCGACCTCG GTTACGAAGG GTTGGGCGGC
CCGGCCGGGC CGCCCACGCT CGCCCGCAAG AAGCCCACGG CTCCTACCCA GAGAGTCACA
CAAGCCTACC ACCAGCAAAA TCAGTGGCCG GGTACCGCGC GGTCGGCGGC CTCGGCAGAG
TGCTCGGAGA TGCCGACCAT GCCGGCGATC CTGGCCTGCT TCGGCCGAGT CGACCCCCGC
GGCCGGCGCT CCGCCCGGCC CGACCGCGGC GCGAGCTTCA GCCGCGTGTT CAGTTCGCCA
CGCGCCTGA
 
Protein sequence
MSFTYTAELP FGDHTVFRLA GLLVAERQRR GTRNGTRTLS ALEQAVMALR WFCDGTRTRP 
PLNDHGVSRS VGYRYLHEGV AVLAWQAPDL REALMRARIA GYRHLIVDGT VIETDRLRVP
GPSEGVDLWW SGKISDHGGN VQILSTPDDG WPLWVSEVPP GREHDSTALR ASGAPPILEE
EWTADLHEVL FDLGYEGLGG PAGPPTLARK KPTAPTQRVT QAYHQQNQWP GTARSAASAE
CSEMPTMPAI LACFGRVDPR GRRSARPDRG ASFSRVFSSP RA