Gene Francci3_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0919 
Symbol 
ID3906083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1061933 
End bp1063417 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content74% 
IMG OID637878253 
Producthypothetical protein 
Protein accessionYP_480032 
Protein GI86739632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.594729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGG TGATGGAGGA TCCGCGCCTT GCTGACGTCG AGCAGTATCA CGGGCGACTG 
CGCTCGGAGC TCGACGTCAT CGCCCGTGGG CCGGTCCTGG TCGGCCCGAA GATCGTCGAG
CATATTCACT CGCTGATCAC CCTCATCGAC CTTCATCAGC CGAATGAGTT CGACCTCTGC
CTGAGCTGCG ACCGTCTCTG GCCCTGCGCG TCGATCATCG CGATCACCGG CATGTCGCCG
GGCGCCGCAC CGGACAGCCG GGCGGTTGAC GAGGCCAGGA TGTTCCCTCC GGCTCGCCCC
GCGGCCAGAC CGCCCGCACC GCAGTCACCC CCGCCACCAC AGTCACCCCC GCCACCACAG
TCACCCCCGC CACCACAGTC ACCGGTCAGG CCGCCTGTCC CGGTTCCTGG ACAGTTCCCC
GAGCCGATGC CCGGGGCGGC TGCCCACCTG CCCATGGGGT CCCCGGCAGA CTCCGACCAC
CCGCCGTCCG GCGGATACTC CGACCGTTCG GGCTACCCGC CCCCGGCTGC CCATCCCGCC
CAGCGGGGTG CTCCGCGGCC AACCGGTGCC CGGCCACGAC TGCCCGGCGG GCGGCAACAT
GCTCCCAACG GATACTCCTC GGACCGGTAT CCGACGGGCG GGTACCCCAC GGACCGGGAC
CGGTCCGCCG CGGACGGCTA CCCGCCGGCC GTAAACCCGT CGGTGGCCCG GGACGATGTC
GTCGTGCCGT CATCCCGGCC CGCTCCCTCG ATCTCCGGTC CGGTCGAGAT GGCCACGGCC
AGGGTCGAGA CGCCGCGCTC GATGACCGGC ACCGGAACCG GGCCAGGCGG CCCGTCGGAC
CCCGGTCCCG CGCTGCCGGG GCCCGGACGC CACCAGGGCC GGCCATCACC CCAGCCGGGG
CCGACGCCGC CGGAATCCAC CCGGTCGGGA TCCATGCAGC CGGGATCCAC ACACCGCGGA
CAGCCCGACC GCGGACAGCC CGACCGCGGA CAGCCCGACC GCGGACAGCC CGACCGCGGA
CGGCCGGGCC CGGCCGAGTC CCCGGGACGC CCCGCGGGGA ACGGGGCGAG AGCCTGGGCA
GACCGTCCCC GAGCACCGCA GCGGCGCGCG GAACCGGGTG GGCAGCCGAC GAGGGACCAG
CCCGGCCCAC GGCCCATCGG CCGTCCCGAC CACCCCGGGC CGGCCTTCGA TCGGAACCCG
ACCCCGCCCG ACGGGCGCGC CCCGGACGGA ACCGGTGGTG TACCGCATGG CTACGGTAGC
CGGTACGCGC AACCTGGGAT CGACCCGCCG AACTCGTCAC ACCCCGGTCG GGCTGCCATG
CCGCGAACAG CCGCGCGAGC GGATGCGGAT GCGGACATGG TGCCGTCCCC CCGCAGCGAT
CTGTCGGCGG CGGCGGCCCG CATCGACCAG ACCGCGGTCG ACGAGGTCAC GCGGGCCTGG
ATGGCTCGCC GCGAGTCGGT GCTGGACGGC ATCGACGTCA TCTGA
 
Protein sequence
MLPVMEDPRL ADVEQYHGRL RSELDVIARG PVLVGPKIVE HIHSLITLID LHQPNEFDLC 
LSCDRLWPCA SIIAITGMSP GAAPDSRAVD EARMFPPARP AARPPAPQSP PPPQSPPPPQ
SPPPPQSPVR PPVPVPGQFP EPMPGAAAHL PMGSPADSDH PPSGGYSDRS GYPPPAAHPA
QRGAPRPTGA RPRLPGGRQH APNGYSSDRY PTGGYPTDRD RSAADGYPPA VNPSVARDDV
VVPSSRPAPS ISGPVEMATA RVETPRSMTG TGTGPGGPSD PGPALPGPGR HQGRPSPQPG
PTPPESTRSG SMQPGSTHRG QPDRGQPDRG QPDRGQPDRG RPGPAESPGR PAGNGARAWA
DRPRAPQRRA EPGGQPTRDQ PGPRPIGRPD HPGPAFDRNP TPPDGRAPDG TGGVPHGYGS
RYAQPGIDPP NSSHPGRAAM PRTAARADAD ADMVPSPRSD LSAAAARIDQ TAVDEVTRAW
MARRESVLDG IDVI