Gene Francci3_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0900 
Symbol 
ID3905157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1041786 
End bp1042223 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID637878233 
ProductNUDIX hydrolase 
Protein accessionYP_480013 
Protein GI86739613 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT CTCACCGTCA CCAGCTCACC GCTGACGTCC ATCTTCTCCT GCTGGACGGC 
GATCAAGTGC TCTTCGGCCG CCGCCAGAAC ACCGGCTACG AAGACGGCGC CTACCACCTC
CCGTCCGGCC ACCTCGAAGC GGGTGAGTCG GTGATCGCGG CCCTCGTCCG CGAGGCCAAG
GAAGAAATCG GCGTGACCAT CGAGCCGGAA GCCGTCGAGT TCGCGCACGT CATGCACAAT
TCGTCGAGCG GCGGCCGGGC GGCCTTCTTC TTCGCCGTGC GCAAATGGGA CGGCGAGCCG
GACAACCGCG AGCCCGACAA GTGCAGCGAG CTGGCCTGGT TCCCGCTGGA CGAGCTGCCC
ACCCACCTGA TCGCCTACTG CCGCACCGCC CTGGAGCACA TCGCCGCCGG TCAGCCCTTC
TCGACCTACG GCTGGTAG
 
Protein sequence
MTASHRHQLT ADVHLLLLDG DQVLFGRRQN TGYEDGAYHL PSGHLEAGES VIAALVREAK 
EEIGVTIEPE AVEFAHVMHN SSSGGRAAFF FAVRKWDGEP DNREPDKCSE LAWFPLDELP
THLIAYCRTA LEHIAAGQPF STYGW