Gene Francci3_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0880 
Symbol 
ID3903863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1024784 
End bp1025314 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID637878213 
Productantirestriction protein 
Protein accessionYP_479993 
Protein GI86739593 
COG category[R] General function prediction only 
COG ID[COG4734] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.911699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGCT TGGCTGACTA CAGTAACGGC TACCTACACG GCCGCTGGGT CGCCGCCGAT 
CGGGACACCG AAGATCTGCA AGCGGCCGTG GACCGTATCT TGGCAACCTC GCCGGCCCGG
CAGCACGGTG AGGCGGCCGA AGAGTGGGCT ATCCACGACT ACGAGGGCTT CGAGGACGAC
GTCACGTCCA CGCTGGGCGA GTGGCCGTCG CTGCAAGACC TGAGCAAGGT CGCCAAAGGT
ATCGCGGAAC ACGGCCTGGC GTTCGGCGCA TGGGTGGCGC ACCTGGGCCG GGCAGACGAT
GAGCTGGTGG ATCGGTTCGA GGAATTCTAC CGCGGTGAGT GGGGCTCGCT CACGGACTAT
GCCGAGGACT ACCTGCAGAA CATTGACTTC TACCGGTTCC TTGACGACCT GCCGGAAGAC
ATACGGCACT ATGTCAGTGT CGATGTGGAG CAGTACGCCG AGGACATAGC GTGCGATCTG
CACGTTGCAG ATACGCCGGA AGGTGGAGTG TGGGTGTTCA GCGTATCGTA G
 
Protein sequence
MASLADYSNG YLHGRWVAAD RDTEDLQAAV DRILATSPAR QHGEAAEEWA IHDYEGFEDD 
VTSTLGEWPS LQDLSKVAKG IAEHGLAFGA WVAHLGRADD ELVDRFEEFY RGEWGSLTDY
AEDYLQNIDF YRFLDDLPED IRHYVSVDVE QYAEDIACDL HVADTPEGGV WVFSVS