Gene Francci3_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0879 
Symbol 
ID3903862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1023820 
End bp1024800 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content66% 
IMG OID637878212 
Producthypothetical protein 
Protein accessionYP_479992 
Protein GI86739592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACG CACCATCTCA CGAAAGGATC ATCAACCAGG CAGACGTTCT ACCCGCCGAG 
CTGTCGCACG ACGAACGCCT GATCAAGCAA GGCATTGAGG CCGCCGCCCA AGAGGAGCGG
CCCATCGACG ACCGCACCGC GCGCTACATC GCCGGACAGC TGCACGGCGG TCAGGTCAGC
GCCCTCTACA GTCTGGCCAG CACCGGCAAC ATCATCGAGG ACACTGTCTA CCACGAGCTG
TACGAAGACC TCGAATCCCA CACGCCGGAG GTCGCCTCCT GGGTCGAAGC GCTTCGGGCC
TACTGCCAGG CTCGGCCGGA CAAGGGACCA GTGAGAGGCT GGACCGAGCA CGCCGCCATC
CTGGACCGCA TCGACGCCAC CCGGGAACGG GCGCGCATGC TCGGCGGGAT CGCCATCGCA
CCGGAACTGG CCGAAGCCAA CGAGGCGCCC GGGAAAGATC ATGCTCTAAA CCCGGACCGG
CTGGACGAAC TGTTCGGCGA ACCGCCGGAC GAGGAGGTCG GCCGCGCAGA TGAGCTGGGC
TGGTTCGGCC TGATCGTCGA TCACGGCACC GGCGGCGGCA CGATCATCTC CCAGGACGAG
CAGGGCTTCC GTTACGTCTG GGAGACGGCC AACGGCGAAG CACTCGACCA GCGGTGGCAG
GCCATCCTCC GGGAGTACGG CACCTACGAA GACTCACTTG TTGACCTAGA ACGACGTGGC
CTGGATGCTC GCCATGAACG GGTCGGCTAT GCCTGTCTGG CATGCGAAGA GCCGATCGTT
GAGCAGGCAA ACGGGCTCGA TCGATCCACC TGGACGCACC AAGACGGCGA ACCGCTCTGC
CCTGTCGTCG ATGGCACCGG CTACGAACCG GCCAAGCCGG GTGTCTGGCG GGACGGTGAG
GTGGTGCCGC TGGCTGACGA GGCTGACGGC GACGACGCAC ACTGGCGACG GACCGCGAGT
CTATGTGGCC AGCTTGGCTG A
 
Protein sequence
MEHAPSHERI INQADVLPAE LSHDERLIKQ GIEAAAQEER PIDDRTARYI AGQLHGGQVS 
ALYSLASTGN IIEDTVYHEL YEDLESHTPE VASWVEALRA YCQARPDKGP VRGWTEHAAI
LDRIDATRER ARMLGGIAIA PELAEANEAP GKDHALNPDR LDELFGEPPD EEVGRADELG
WFGLIVDHGT GGGTIISQDE QGFRYVWETA NGEALDQRWQ AILREYGTYE DSLVDLERRG
LDARHERVGY ACLACEEPIV EQANGLDRST WTHQDGEPLC PVVDGTGYEP AKPGVWRDGE
VVPLADEADG DDAHWRRTAS LCGQLG