Gene Francci3_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0866 
Symbol 
ID3903849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1009861 
End bp1010265 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content66% 
IMG OID637878199 
ProductMov34/MPN/PAD-1 
Protein accessionYP_479979 
Protein GI86739579 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCGAA TCGACCGTGC CTGCTATGAG GCGATCGTCG CCCATGCCCG TCGAGATCAT 
CCCGACGAGG CCTGTGGCAT CGTCGCCGGC TCCCTGGGGT CGGACCGGCC GAAGCGGTTC
ATCCCGATGG AGAACGCGGA GCGTTCGCCG ACCTTTTACC GCTTCGACCC AATGGAGCAG
CTCAAGGTGT GGCGGGAGAT GGACGACCGG GACGAGGAGC CCGTCATCAT CTACCACTCG
CACACCGCAA CCGAGGCGTA CCCGTCCAGA ACCGACGTGT CCCTCGCGGC CGAGCCGGGC
GCGCACTACG TACTGGCCTC CACCCGGGAG CCGGACGTGA CCGAGTTCCG GTCCTACCGG
ATCGTCGATG GCGTGGTCAC CGAGGAGCCG GTGGAAATCG TCTGA
 
Protein sequence
MLRIDRACYE AIVAHARRDH PDEACGIVAG SLGSDRPKRF IPMENAERSP TFYRFDPMEQ 
LKVWREMDDR DEEPVIIYHS HTATEAYPSR TDVSLAAEPG AHYVLASTRE PDVTEFRSYR
IVDGVVTEEP VEIV