Gene Francci3_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0625 
Symbol 
ID3903493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp709861 
End bp711132 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content72% 
IMG OID637877958 
Productalpha/beta hydrolase fold 
Protein accessionYP_479738 
Protein GI86739338 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.537293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA CCGTGGGTGC GATCGCGGGT TCCCGCACGG CTCGGGCCAC GGGATCGCTC 
GGGGTGGTTG GTGCCGCCGC CGTCGCGGCG GGCCTGGTCG CCGAGCGGCG GATGATCCGC
CGTCGGCGTG AGACGGCCGA TCTCGCGTCC GACGCGCGGA TGGGGCCGAT CGGGGGCTGG
GTCACCACCG TGATCGCGGG GGACGGTGTT CCGCTGTATA TCGAGGAGAC CGGCCCGTCG
GACGCCCCGG TGACGCTGGT GTTCGTCCAC GGGTTCTGCG TCACGGCCGA TTCCTGGATC
CTGCAGCAGC GGGCGCTGAC AGACCTCGGC CGGATGGTCT TCTACGATCA GCGGGCGCAT
GGGCGTTCCG GGCCGTCCGA GGTCAAGAAC TGCACTATCG ACGCACTCGC CGACGACCTC
TTCCGGGTGA TCACCGAGCG GGTCCCCCGG GGGCCGATTA TCCTGGTGGG CCATTCGATG
GGCGGCATGA CGGTGCTGGG CCTGGCCGAC ACCCACCCGG AACTGTTCGA TGACCGCATC
GTCGGGGTGG CCCTGCTCGC CACCAGCGCC GGTGAGCTGG CCCGGCTGAC CTTCGGGCTG
CCGGCGTCGG TGACCGGGGT GGTCCGCCGC GTTCTGCCGG GTTTCGCGGT TGGTATGCGG
CACGCGCCGA GCCTGCTCGA ACGTGCCCGG CGGCGGGGCA GCGACCTGTC GTGGGAGCTG
ACGCGGCGCA TCGGGTTCGG ATCGACCGAA CTGCCGCCGT CGGTGGTCTC CTTCCTGGAG
ACCATGGTCG CGGACACCCC GATCCCGGTC ATCGCGGCGT TCCTGCCCAC CCTGCTCGAC
CACGATCGGC TCGCGGCGGC CGAGCGACTG GCGGAGATCC CGACCGTGCT CATCGTCGGG
GACGTTGACC TGATGACCCC GCTCGCCCAC AGCCGTACCC TGGCGGAGGC GTTGCCCCGG
GCGGAGCTCA TCGTCGAGGA GGGCGCCGGG CACGCCATCA TGCTGGAACG CCCGGACGTG
GTGAACGCCG CAATCCGGGA GATTGCGCGG CAGGCGACGG CGCCACGCGC CATGCCGCGC
CCGCGGTCGG GGTCGGCACA GACAGGCCGG TCGGCGCCGG CACAGACAGG TCGGTCGGCG
CCGGCACAGA CAGGTCGGTC GGGACGGACC GGTCGGTCGG GGTCGGGACG GACCGGTCGG
TCGGCGCGGT CCGAGACATT CTCCGTCTCC CCACGCGGGC CCCGGAGCGA GGCGACGACG
GAAGGCGCAT GA
 
Protein sequence
MAKTVGAIAG SRTARATGSL GVVGAAAVAA GLVAERRMIR RRRETADLAS DARMGPIGGW 
VTTVIAGDGV PLYIEETGPS DAPVTLVFVH GFCVTADSWI LQQRALTDLG RMVFYDQRAH
GRSGPSEVKN CTIDALADDL FRVITERVPR GPIILVGHSM GGMTVLGLAD THPELFDDRI
VGVALLATSA GELARLTFGL PASVTGVVRR VLPGFAVGMR HAPSLLERAR RRGSDLSWEL
TRRIGFGSTE LPPSVVSFLE TMVADTPIPV IAAFLPTLLD HDRLAAAERL AEIPTVLIVG
DVDLMTPLAH SRTLAEALPR AELIVEEGAG HAIMLERPDV VNAAIREIAR QATAPRAMPR
PRSGSAQTGR SAPAQTGRSA PAQTGRSGRT GRSGSGRTGR SARSETFSVS PRGPRSEATT
EGA