| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0557 |
|---|
| Symbol | |
|---|
| ID | 3904208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 648954 |
|---|
| End bp | 649826 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637877886 |
|---|
| Product | heat shock protein HtpX |
|---|
| Protein accession | YP_479670 |
|---|
| Protein GI | 86739270 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACACC GCCACTTCAA CGGTCTGAAG ACCGCGCTGC TGCTGGGCGT GCTGTCCGCC
GCCATCATCG TGGTGGGTTC GCTGTTCGGG CGCGGAGGTC TGGTCATCGC GCTCGTGCTC
GCGGTCGGTA TGAACGGCTT CGCCTACTTC TTCTCTGACC GGATAGCCCT GCGGGCCATG
CGGGCCTATC CCGTGACGCA GGTCGAGCAG CCCCGGCTCT ACGCGATCGT CGGGGATCTC
GCCCGCAATG CCCGGATGCC CATGCCGCGG CTGTACCTCA GCCCGACCCG GGCGCCCAAC
GCCTTCGCTA CCGGCCGTAA CCCGCGAAAC GCGGCGGTCT GTTGCACTGA GGGCATCATG
GAGATTATGG ACGATCGTGA GCTACGCGGC GTTCTCGGTC ACGAGCTCAG CCACGTCTAC
AACCGGGACA TCCTGATCGC ATCGGTGGCC GGTGCCCTCG CCAGTGTTAT CGTCTATCTG
GCGAACATGG CCCAGTTCCT GGCTATTTTC GGTGGGCGGA ACGATGAGGA CGGTCCCGGC
ATCTTCGAGC TTCTGCTGCT GATGATCCTG GGTCCCGTCG CGGCGACGAT CATCCAGCTC
GCGATCAGTC GGTCCCGGGA GTACCAGGCC GACGAGTCCG GCGCGACGCT CACCGGTGAC
CCGATCGGGC TGGCGAACGC GTTGCGCAAG CTGGACGCCG GCACCGCGGC GCGGCCCCTG
CCGCAGACCT CCAAGCTCGG TCCCGCCGCC GCGCTCATGA TTGCAAATCC GTTCCGGGGT
GGGGGGGTCG GGAAGCTGTT CTCCACCCAT CCGCCCATGA ACGAGCGGAT CGAGCGTCTC
GAACAGATGT CACGCATGAA TCCGTATCGG TGA
|
|---|
| Protein sequence | MPHRHFNGLK TALLLGVLSA AIIVVGSLFG RGGLVIALVL AVGMNGFAYF FSDRIALRAM
RAYPVTQVEQ PRLYAIVGDL ARNARMPMPR LYLSPTRAPN AFATGRNPRN AAVCCTEGIM
EIMDDRELRG VLGHELSHVY NRDILIASVA GALASVIVYL ANMAQFLAIF GGRNDEDGPG
IFELLLLMIL GPVAATIIQL AISRSREYQA DESGATLTGD PIGLANALRK LDAGTAARPL
PQTSKLGPAA ALMIANPFRG GGVGKLFSTH PPMNERIERL EQMSRMNPYR
|
|---|
| |