Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0524 |
Symbol | |
ID | 3905435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 609331 |
End bp | 609876 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877853 |
Product | response regulator receiver protein |
Protein accession | YP_479637 |
Protein GI | 86739237 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.305045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGC GCGGGGTCGG GCGGGGCGCG TACAAAAGAA TGGTGGATAC CGGCCGTTCG GTGGATGCCG ACACCGTCGG GCTCGTCGGG GAGAAGGCCG TCGGCCTGGC CGGCGGTTCC GCTGTGGGCC GTGGTTCCCC TCCGGGGGAG CAGGTGCCTC CGCCCGGTCC ACGGCGCGTC GTCGTCGTTG ACGACGCGGA CGGCGTGCGC GAACTATTGT GCCTGTTGCT GGAGACCGAA CCCGACTTCG TGATCGTCGG CGCCGCGTCC AACGGCGCGG AGGCGATCGA CGAGGTCGTC CGCACCGAGC CGGACCTCGT GCTGCTTGAC CTGGCCATGC CGGTCCTCGA CGGCATCGCC GCCCTGCCGC GGATCCGGCG GGTCGTGCCG CGGGCCACGG TGGTGATTTT CACGGGATTC TCTGAGGATG CGTTGCTCGA CCAGGTGCTG GAACTCGGCG CGGACGCCCT GCTGGAGAAA GGGCTGGCCA CCGGTCCGCT GGTGGAGCAG CTTCGACGGC TGTGCGCCGT CCACCGGACG ATCTGA
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Protein sequence | MTMRGVGRGA YKRMVDTGRS VDADTVGLVG EKAVGLAGGS AVGRGSPPGE QVPPPGPRRV VVVDDADGVR ELLCLLLETE PDFVIVGAAS NGAEAIDEVV RTEPDLVLLD LAMPVLDGIA ALPRIRRVVP RATVVIFTGF SEDALLDQVL ELGADALLEK GLATGPLVEQ LRRLCAVHRT I
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