Gene Francci3_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0524 
Symbol 
ID3905435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp609331 
End bp609876 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content70% 
IMG OID637877853 
Productresponse regulator receiver protein 
Protein accessionYP_479637 
Protein GI86739237 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.305045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC GCGGGGTCGG GCGGGGCGCG TACAAAAGAA TGGTGGATAC CGGCCGTTCG 
GTGGATGCCG ACACCGTCGG GCTCGTCGGG GAGAAGGCCG TCGGCCTGGC CGGCGGTTCC
GCTGTGGGCC GTGGTTCCCC TCCGGGGGAG CAGGTGCCTC CGCCCGGTCC ACGGCGCGTC
GTCGTCGTTG ACGACGCGGA CGGCGTGCGC GAACTATTGT GCCTGTTGCT GGAGACCGAA
CCCGACTTCG TGATCGTCGG CGCCGCGTCC AACGGCGCGG AGGCGATCGA CGAGGTCGTC
CGCACCGAGC CGGACCTCGT GCTGCTTGAC CTGGCCATGC CGGTCCTCGA CGGCATCGCC
GCCCTGCCGC GGATCCGGCG GGTCGTGCCG CGGGCCACGG TGGTGATTTT CACGGGATTC
TCTGAGGATG CGTTGCTCGA CCAGGTGCTG GAACTCGGCG CGGACGCCCT GCTGGAGAAA
GGGCTGGCCA CCGGTCCGCT GGTGGAGCAG CTTCGACGGC TGTGCGCCGT CCACCGGACG
ATCTGA
 
Protein sequence
MTMRGVGRGA YKRMVDTGRS VDADTVGLVG EKAVGLAGGS AVGRGSPPGE QVPPPGPRRV 
VVVDDADGVR ELLCLLLETE PDFVIVGAAS NGAEAIDEVV RTEPDLVLLD LAMPVLDGIA
ALPRIRRVVP RATVVIFTGF SEDALLDQVL ELGADALLEK GLATGPLVEQ LRRLCAVHRT
I