| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0517 |
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| Symbol | |
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| ID | 3905175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 603764 |
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| End bp | 604546 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637877846 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_479630 |
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| Protein GI | 86739230 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.486625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATG TGTTCAGTGC CCCCGAGGAG GGGGCCGGAG CGCGCCTGCC GTGGGTGGTC
GGGGTGAGCG GCGCCAGTGG AACCCCCTAC GCGGCCGCGG TGCTGCGTGG CCTGCTGGCC
GCTCGGCTGC CAGTCGATCT GGTGCTGTCC CGCGCGGCCC GCCTGACCCT GCTCGATGAG
ACGGGTATCG CCTGGCGTGA CTCCGCCTGG GCGAAAGCCC TGGTCACGTG GCTGTCCATG
CCCCCGGGCG GGGTGTCACC TCCGGAGGGT CTGTCGGCGC GGCTGGCCGA TCGTGACGTG
CTGGCCGATA CGGTGTCCAC CCTCGTCGCG GTACATGCCC CTGGTGATCT GGGGGCGCCG
ACGAGCAGCG GTTCGTACCC GACTCGCGGG ATGATCGTCG TCCCGGCGAG CACCGCCTGC
CTGGCCGGCA TCACCCTGGG ACTGTCCAAG GATCTGTTGC AGCGGTCGGC GGATGTCACG
CTCAAGGAAG GCCGCCGTCT GATCGTCGTC CCGCGGGAGA TGCCCTACAC CCGCGCGACG
CTGCGCCACA TGCTGGACCT GCACGACGCC GGGGCGGTGG TGGCCGCGGC GAGCCCGGGG
TTTTACGCGG GTGTGCGGAC GGCCGGCGAT CTCGTCGACT TCGTGGCCGG GCGGGTGCTC
GACGCCGCCG ACGTGCCGCA CACGCTCTTC CGGCGTTGGA CCGGCGAGCT CGGCGGCGCC
CGCCGTGACC TGGCGGACCG CCGTGACCTG CTGGAGGTCG AGACGGCGCC ACCGGCCGGG
TGA
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| Protein sequence | MADVFSAPEE GAGARLPWVV GVSGASGTPY AAAVLRGLLA ARLPVDLVLS RAARLTLLDE
TGIAWRDSAW AKALVTWLSM PPGGVSPPEG LSARLADRDV LADTVSTLVA VHAPGDLGAP
TSSGSYPTRG MIVVPASTAC LAGITLGLSK DLLQRSADVT LKEGRRLIVV PREMPYTRAT
LRHMLDLHDA GAVVAAASPG FYAGVRTAGD LVDFVAGRVL DAADVPHTLF RRWTGELGGA
RRDLADRRDL LEVETAPPAG
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