Gene Francci3_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0498 
Symbol 
ID3903018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp583241 
End bp584050 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content74% 
IMG OID637877828 
Producthypothetical protein 
Protein accessionYP_479612 
Protein GI86739212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.167993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGACA GCATCCCGAT CCGGCTGGCC CCGCTGCCCG GTGAGGACCT CGACAGCTAC 
CTGCACGCCT ACGCCCGCCT GCTGCACGCC GAGGTCTCCG ACATCCTCAC CCTCGCGGGC
CTGGCAGGTC AGCCGAGCAC CGAGAAGCTC GGCCACCGGC CCTGGACCTA CCGGCTCGAC
CCCGTCGAAC GCGCCGCGCT CGCCACCGTC ACTGGCCTTC GGCCACAGAC TCTCACCGCG
ATGACCCTCG CCCGCTACGA CGACACCGGC CTACTGAGCG GTATCCGGCC GACCGGACGG
CCCCGGCCGC CCCGCTGGTG GAACCAGCTC AAAGGATCAC GGTTCTGCCC CCGGTGCCTC
GCCGGCAACG GCGGACGGTG GATGCTGGCC TGGCGGCTGC CCTGGACCTT CGCCTGCACC
CGTCATCATC TTCTGCTCGT CGACACCTGC CTCGCCTGCG GCCGGGCTCA CCGCCCCGCC
CTTGACCAGC CGCCCCGCGG CCCCGGGACG GTGCGACACG ACCGGCCTGC CGCTCCCGTC
ACACCCGCGC GGACGCCAGC CGCCCGCCTG CACGGCCCCA CCCGCCGACA CCGACGCGGT
CGCGCTGCGT CCCGATGGTC CGATCGTCAC CGCGCAACGT CACGTAGACA ATCTGCTCGC
CGAGCTCGGC CGCAGCCATC CTGGCACCGT CGCCCGGCCG GCGGGTGTCG CGCAGCGCCT
CGACGACCTG CACGCCGTCG CCTTCGACAC CCACGGCGCC CCCATCGATT ACGCCCGCCG
CCGGCGATGG CGACGCCTGC GCCAGCCTGA
 
Protein sequence
MVDSIPIRLA PLPGEDLDSY LHAYARLLHA EVSDILTLAG LAGQPSTEKL GHRPWTYRLD 
PVERAALATV TGLRPQTLTA MTLARYDDTG LLSGIRPTGR PRPPRWWNQL KGSRFCPRCL
AGNGGRWMLA WRLPWTFACT RHHLLLVDTC LACGRAHRPA LDQPPRGPGT VRHDRPAAPV
TPARTPAARL HGPTRRHRRG RAASRWSDRH RATSRRQSAR RARPQPSWHR RPAGGCRAAP
RRPARRRLRH PRRPHRLRPP PAMATPAPA