| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0486 |
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| Symbol | |
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| ID | 3903006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 568277 |
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| End bp | 569464 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637877817 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_479601 |
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| Protein GI | 86739201 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.471298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGGA TCGACCCGAC GAGTACCGAC CCGACGAGTA CCGATCCGAC GAGCATCGGC
GCCACGGGTA CCGGCGCCAC GGGTACCGGC GCCGACCTGC TGGCCCGTTT CGCCGGCCGC
CGGCTGCGGC TGGGAACACG GCGCTCGGCG CTGGCGCTGG CCCAGTCCGG GACGGTCGCT
GCCACCCTGC GGGCGCGGGT GGGCTGCGCC GTCGAGCTGG TGCCGATCGT CACGGCGGGG
GACCGCTCGT CCGGGGAGAT CAGCCAGATC GGCGGGACCG GCGTCTTCGT CAGCGCGCTG
CGCGACGCCC TGCTGTCCGG CGAGATCGAC CTGGCGGTCC ACTCGTTGAA GGACCTTCCG
ACGGCCACCC CACCCGGTCT GGTGCTCGCC GCGGTCCCGC CGCGGGCGGA CCCCCGGGAC
GTGCTGGTCG CCCCGAGCGG GCGGCGCCTG GCCGAGCTCA GGGCCGGCGC CCGGATCGCG
ACCGGATCCC CACGTCGCGC CGCGCAGCTG CGTGCTCTCG GCCTCGGGCT GGAGGTCGTC
ACGATCCGCG GCAATGTCGA CACCCGGTTG AAGAAGGCCA TCGACGGTGA GGTGGACGCG
GTCGTCCTCG CGCACGCCGG GCTGGCGCGG CTCGACCGGC TCGATGCCGT CACCGAGATC
CTCGAACCCA CGGTGATGCT GCCCGCGCCC GGCCAGGGAG CCCTGGCGAT CGAGTGCACG
GGCGGTGCCG GGCTCGTCGT GGCCGGTCCG GCGCGCGCTC TGGTGCCCGC CGGGCCGGGT
TCAGGTCCCG CTGTGGGACA AACCGGTGGC GAAACGTGGT CAGATGGCGG CCAGCCCGTC
GATACGGGCC TCGCCGAGCT GCTACGGTTT GTGCTCGATG ACGCATCGTC GTCCGTCGCG
GTCAGAGCGG AACGCGCGTT CCTCGCCGGC ATCGAAGCTG GTTGTACTGC CCCGGTCGGC
GCCTTGGCCG AGCTTCTTCC GGAGCTGGCC GAAGGAGCCG CGGCGGAGGC CGGCGGTGCG
CCTCCCGCGG GTCGTCTGTG CCTGCGGGCG GTCGTCGCCG CGCCGGACGG AAGCGATGTC
CTCCGGCGTG ACGTCACCGG ATCCGCCGTC GACCCGGAGG CGCTCGGGCA GCGCCTCGCG
GACGACATGC TGTCCGCCGG AGCACACTCG CTGATGGGAA CCCGCTGA
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| Protein sequence | MTGIDPTSTD PTSTDPTSIG ATGTGATGTG ADLLARFAGR RLRLGTRRSA LALAQSGTVA
ATLRARVGCA VELVPIVTAG DRSSGEISQI GGTGVFVSAL RDALLSGEID LAVHSLKDLP
TATPPGLVLA AVPPRADPRD VLVAPSGRRL AELRAGARIA TGSPRRAAQL RALGLGLEVV
TIRGNVDTRL KKAIDGEVDA VVLAHAGLAR LDRLDAVTEI LEPTVMLPAP GQGALAIECT
GGAGLVVAGP ARALVPAGPG SGPAVGQTGG ETWSDGGQPV DTGLAELLRF VLDDASSSVA
VRAERAFLAG IEAGCTAPVG ALAELLPELA EGAAAEAGGA PPAGRLCLRA VVAAPDGSDV
LRRDVTGSAV DPEALGQRLA DDMLSAGAHS LMGTR
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