Gene Francci3_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0454 
Symbol 
ID3903260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp532641 
End bp533030 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content73% 
IMG OID637877785 
Producthypothetical protein 
Protein accessionYP_479569 
Protein GI86739169 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.552399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCGA TTTGGCAGAC TGGCACGATG GCCCGCCCGC TCGTCGTCAA GGTCACCGCC 
GGGACGGATG CGCCGGAACG GTGTTCCCAG GCGTTCACGG TCGCGGCGGT CGCCGTCGCC
GCCGGTACAG ACGTCTCGCT CTGGCTTACC GGGGAGTCCG CCTGGTTCGC GCTGCCCGGC
CGGGCGGAGG AGTTCAGCCT GCCGGAGGCG GCGCCGTTGC CCGATCTGCT CGCCGCCGTC
CTCGCCGGGG GTCGCGTCAC CCTGTGCACC CAGTGTGCGG CCCGGCGCTC CATCGGCCCG
GACGACGTCC TGCCCGGCGT CCGCATCGCC GGTGCCGCCG CGTTCGTCGA CGAGGTTCTC
GCGGACGGCG TGCAGGCCCT CGTCTACTGA
 
Protein sequence
MGAIWQTGTM ARPLVVKVTA GTDAPERCSQ AFTVAAVAVA AGTDVSLWLT GESAWFALPG 
RAEEFSLPEA APLPDLLAAV LAGGRVTLCT QCAARRSIGP DDVLPGVRIA GAAAFVDEVL
ADGVQALVY