| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0439 |
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| Symbol | |
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| ID | 3903628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 521590 |
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| End bp | 523197 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877770 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_479554 |
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| Protein GI | 86739154 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCT TTGATCATCG AAAGGACGGC CAGAGCCGTG CGGGCAGCGG GCCGATCCTA
CAGGCACCCA GCAGGGGCAG ACACCCGACA GGCCACGCCG CCGTCCCGGC CAGGTCCGGA
ATCCCACGAG GAGGAGCACT AGCTTCACCG AGAGTGATTG ATCGTACAAG TCTGTTCGCA
TCCCCGGCCC AGGACAGCCC GACGACGCCG GTAGCGACAC CGATGACGCT CGCCCGCGCC
GCCACCGGAC TGCGCCCAGT AATCAACGCT ACCGGCGTCC TGCTCCACGG AGGGCTCGGC
CGAGCTCCCC TGTCCGCGGC CGCCCGCGCG GCCCTCGACC TGGCAGCCGG CACGACCGAC
CTCGAGCTTG ACCTCGGGAC CGGACGGCGA GGACGACGAG GACGTACCGC CCTGGCCGCG
TTGGCAGCCG CGGTGCCCGC GGCGGCGGGC GTGCACATCG TCAACAACAA CGCGGCAGGG
CTGATCCTCG CGGTGACGGC GCTGGCCGGG CGGCGGGAGA TCGTGGTGAG CCGCGGGGAG
CTGGTGGAGA CGGCGGACGG GTTCCGGCTG CCCGAACTGC TGGTCTGCAC CGGGGCTCGA
CTGCGGGAAG TCGGCACCAC CAACCGCACG ACGCTCGGGG ACTACGCCGA CGCGATCGGG
CCGGAGACCG GGCTCGTGCT GCACGTGCAT CCGTCCAGCT ATCAGGTGGT GGGGCTGACT
GACACCCCTG CGATCAACGA TCTTGCCGCG CTCTGCGCCG ATTTCGAGAT CCCCCTCGTC
GGTGACTGCG GCTCCGGGCT GCTACACCCC GAGCCGCTCC TCGCCGATGA ACCCGACGTC
ACGACCTGGC TCGGCTTCGG CGTTAACGTG GTCACGACCA GCGCGGACAA GCTGCTCGGC
GGGCCTCAGT GCGGCCTGCT GCTGGGACGC GCCGACCTGA TCGACCGGAT ACGTCGGCAT
CCGATGGCCC GGGCAATGCG GGTCGGAAAG CTCACACTCG CCGCGCTGGA AGCCACCCTC
AGCCATCCCG ACTCCCCGGT CAGGCAGGCG TTGCACGCCC GACCGGAACG GCTGACAACG
CGGGCCGAGA CGCTCGCCGC GTGGCTACGG CGTTCGGGCA TCGCAGCCTC GGCTGTGGCG
AGTCGTGCGG TCGTTGACGG TGGCGGGGGT GGATCGTCGC CGCTGCCGAA CGACGCCGCA
TTCCGTCGAT CGGGCGGCCA CCGGCGCGAG GGCGCACGAG ACGAAGACGG CATGGCCCCG
GCGGGCCCGG AGAGTGGTCT GACGATCAAA GGGTTCGGCG GCTTCGGCCC GGAGCTGCCA
AGCGCCGCGG TGGCCCTGGA CGCAGTCATC GCCGCCCCCC TGCGCCAGGG CGAGCCGTCC
GTGTTGGGCC GGGTGGAGCA GGGATGCTGC CTGCTCGATC TGCGGACCGT TCCGGTGGAA
CTCGATCCCG TCCTCGCCGC CGCCGTGCTG GCTGCCGCGA CCGAAGCCGG CGCGACCACG
ATCACCGACG CCCCGACCGA GCCGCACATC GCCGAGGATG CCGACGTCAT GACGATCGAA
TCCATGGCCA TCCCGCGCGC CACCGTGCCC GGCCGACGGG CGCCGTGA
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| Protein sequence | MRRFDHRKDG QSRAGSGPIL QAPSRGRHPT GHAAVPARSG IPRGGALASP RVIDRTSLFA
SPAQDSPTTP VATPMTLARA ATGLRPVINA TGVLLHGGLG RAPLSAAARA ALDLAAGTTD
LELDLGTGRR GRRGRTALAA LAAAVPAAAG VHIVNNNAAG LILAVTALAG RREIVVSRGE
LVETADGFRL PELLVCTGAR LREVGTTNRT TLGDYADAIG PETGLVLHVH PSSYQVVGLT
DTPAINDLAA LCADFEIPLV GDCGSGLLHP EPLLADEPDV TTWLGFGVNV VTTSADKLLG
GPQCGLLLGR ADLIDRIRRH PMARAMRVGK LTLAALEATL SHPDSPVRQA LHARPERLTT
RAETLAAWLR RSGIAASAVA SRAVVDGGGG GSSPLPNDAA FRRSGGHRRE GARDEDGMAP
AGPESGLTIK GFGGFGPELP SAAVALDAVI AAPLRQGEPS VLGRVEQGCC LLDLRTVPVE
LDPVLAAAVL AAATEAGATT ITDAPTEPHI AEDADVMTIE SMAIPRATVP GRRAP
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