| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0340 |
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| Symbol | |
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| ID | 3905185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 393749 |
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| End bp | 395140 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637877669 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_479456 |
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| Protein GI | 86739056 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCAAC GGCAGAACTC GGAGATTGTC ACCGAGGTCG CGTCGCTGGT ACAGGATCCG
GACATCGCCG AGCGGCTGAC CGTGACCGGA CCCGCCGACG TCCTGCCCAG CCTCTACCGG
GTGACGACGG TGGCGACCGC GTCGGTGGCG GCCGCGGCCG TCGGGGCTAG CCGCCTGCTC
GCGGCCCGCG GCGGCGGGGC CCCGCCGGAG GTCACCGTGG ACACTCGTCA CGCGAGTGCG
GTCTTCCGCA GCGAACGGTA CCTGCGAGTG GCCGGCAAGC CACCGCCGAG CCCGTGGGAC
CCGATCTCCG GGTACTACCG CACCGGGGAC GACCGGTGGA TCCAGCTGCA CTGCAACTTC
CCGCACCACC GCAACGGGAT CCTGGATCTT CTTGGGACGC CGGGCGAGCG CGCCGCCGTC
GAACGGGTCA TCCGCCGTTT CGAGGCCGAG CCGCTGGAAC TCGAGCTGCA CGCCATGGGT
CTGTGCGCCA GCATGGCCCG TAGCGAGCGG GAGTGGCGCG AGCACCGGCA GGCCCGGGCG
GTTGACGAGC TTCCCCTCGT CGAGGTGCGC CGGCTCGGCG ACGGCCCGGC GCTCGCCGCG
CCCCCGGCCG AGACGCCGGC CGCGGGTCTG CGGGTGCTCG ACCTGACCCG GGTCATTGCC
GGTCCCGTCG CCGGTCGCAC GCTGGCCGCC TACGGAGCCG ACGTCCTGCG GGTCGGCGCC
GCCCACCTGC CGGAGGTGCA CACGGTGCTC GTCGACACCG GGTTCGGCAA GCGCAACGCC
TTCCTCAACC TGCGGGTGAC CGCGGACGCC CGCCGGCTGC GCGAGCTGAT CGCCTCGGCG
GACGTGGTGC TCCAGGCTTA CCGGCCGATG GCCCTCGACC GGCTCGGCTT CGGCCCGGAG
GCGGTCGCCA GGATCCGGCC GGGCATCGTC TGCGCGACCA TCACCGCGTA TGGACGGCAG
GGCCCCTGGA GCGGTCTGCG CGGGTTCGAC AGTCTGGTCC AGACCGCGTC CGGCATCGCG
ACCGCCGCCG CGGCGGTGAC CCGGTCCGAC CGCCCCGTGC CGCTGCCGGC ACAGGCCCTT
GATCATTCGA CTGGCTACCT CACCGTCTAC GGGGTGCTGG ACGCGCTGGC GCGCCGGGCG
ACCGAGGGGG GCAGCTGGCA CGTCGGTGTG TCCCTGACCC GGACCGGTCG TTGGCTGCAG
GGGCTGGGAC ACCACGACAC GCTCGCGCTC CCCGACCCGA CCCGGGAGGA GGCCGAGGAG
TTCTGCGCCA CGATGAACAG CGAGTTCGGA CCCCTGTCGT ACATCCGCCC GGCCGCCACC
GTGGCCGGCG TCGCGCCGAG CTGGAGCTCC CCGCCGGCAC AGCTGGGCAC CAGCCCGGCG
GTCTGGGCAT AG
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| Protein sequence | MGQRQNSEIV TEVASLVQDP DIAERLTVTG PADVLPSLYR VTTVATASVA AAAVGASRLL
AARGGGAPPE VTVDTRHASA VFRSERYLRV AGKPPPSPWD PISGYYRTGD DRWIQLHCNF
PHHRNGILDL LGTPGERAAV ERVIRRFEAE PLELELHAMG LCASMARSER EWREHRQARA
VDELPLVEVR RLGDGPALAA PPAETPAAGL RVLDLTRVIA GPVAGRTLAA YGADVLRVGA
AHLPEVHTVL VDTGFGKRNA FLNLRVTADA RRLRELIASA DVVLQAYRPM ALDRLGFGPE
AVARIRPGIV CATITAYGRQ GPWSGLRGFD SLVQTASGIA TAAAAVTRSD RPVPLPAQAL
DHSTGYLTVY GVLDALARRA TEGGSWHVGV SLTRTGRWLQ GLGHHDTLAL PDPTREEAEE
FCATMNSEFG PLSYIRPAAT VAGVAPSWSS PPAQLGTSPA VWA
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