Gene Francci3_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0269 
Symbol 
ID3905709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp309008 
End bp309484 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content74% 
IMG OID637877597 
Producthypothetical protein 
Protein accessionYP_479386 
Protein GI86738986 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACC CACAGAACCG CGCCGGGAGT GGGGCCTCCG CCGGGGGCGG GGCGCTGGGG 
CAGCTCTTCG AACAGGCGCA GAAGATGCAG GCCGCGATCC TCGCCACCCA GGAGGACCTC
GCCACCGCCC GGGTGGACGG GACGGCCGGC GGCGGCCTGG TCCGCGCCAC CGTCAACGGC
GGCGGGGAAC TGGTCGATCT GACGATCAGC CCCGAGGCGG TCGACCCCGA GGACACTGAG
ACGCTCGCGG ATCTGATCCT CGCGGCGGTC CGTGACGCGA CCACGAATGC CCACAAGCTC
GCCGCCGACC GGATGGACGC GATCACCGGT GGCCTCGGCG CGGGCGGCCC GGCAGGTCCG
GGTGGCGCCG ACGGACTCGG TGGACTCGGT GGACTCGGTG GACTCGGTGG CCTGCTGTCC
GGTGGCGGCC TCGGAGGCCC CCCTCCGGGT GGCCCGGGCC TTCCCGGGCT CGGCTGA
 
Protein sequence
MSNPQNRAGS GASAGGGALG QLFEQAQKMQ AAILATQEDL ATARVDGTAG GGLVRATVNG 
GGELVDLTIS PEAVDPEDTE TLADLILAAV RDATTNAHKL AADRMDAITG GLGAGGPAGP
GGADGLGGLG GLGGLGGLLS GGGLGGPPPG GPGLPGLG