Gene Francci3_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0262 
Symbol 
ID3903670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp303308 
End bp304576 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content68% 
IMG OID637877590 
Productaspartate kinase 
Protein accessionYP_479379 
Protein GI86738979 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.852173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCT TGGTCGCGAA GTTCGGTGGG TCCTCCGTTG CCGACGCGGA CCGCATCAAA 
CGAGTCGCTG AGCGAATCGT GGAGAACCGG CGGGCCGGCA ACGACGTCGT CGTGGTGGTC
AGCGCGATGG GTGACACCAC CGACGAACTT CTCGATCTGG CCGAACAGGT CTCGCCGCTT
CCGCCCGCCC GGGAGCTCGA CATGCTGCTC ACCGCCGGTG AGCGAATCTC GATGGCGCTG
CTGGCCATGG CGATCACCAC CCTCGGCGCC GAAGCCCGCT CGTTCACCGG CTCCCAGGCC
GGAGTCATCA CCGACTCGGT GCACGGCAAG GCGCGCATCA TCGACGTTAC CCCCGGGCGG
ATCCGCGCCG CCCTGGACTC CGGCGCCATC GCGATCGTCG CGGGCTTCCA GGGTGTGAGC
CAGGACACGA AGGACATCAC CACGCTCGGT CGAGGCGGCT CGGACACGAC CGCGGTGGCG
CTCGCTGCCG CGCTGGGAGC GGACGCCTGC GAGATCTACA CCGATGTAGA CGGCGTGTTC
ACCGCCGACC CGCGCATCGT CCCCGACGCC CGCCGCATCG ACACGATCTC TTATGAGGAG
ATGCTGGAGA TGGCGGCGTG CGGCGCGAAG GTCCTCATGC TGAGGTGCGT CGAGTACGCC
CGCCGTTACA GCGTCCCCGT GCATGTCCGA TCGTCCTTCT CTGCGAAGCC GGGCACGTGG
GTCACCGAGA TTCCGGAGGA ACAGCTCGTG GAACAGGCCA TCATCCGTGG GGTCGCGCAC
GACCTCAGCG AGGCGAAGGT GACGGTCGTC GGATGCCCGG ACAAGCCCGG GGTGGCGGCG
GCGGTGTTCC GGGCCGTGGC GGACACCGAC GTCAACCTGG ACATGATCGT TCAGGTCGGC
TCGGTCGCCG GGTCGGGGCG GACGGATATC TCGTTCACCC TGCCCAAGGC GGATGGACGT
ACCGCGCTCA CCGCGCTCAC GAAGGTCCAA AGCGAGATCG GCTTCGAGCG CACCCTCTAC
GACGACCACA TCGGCAAGCT GTCGCTGATC GGCGCGGGGA TGAAGTCGCA CCCGGGGGTG
TCCGCCCGGT TCTTCGGCTC CCTCGCCGAC GCGGGGGTCA ACGTCGAGAT CATCTCCACC
TCTGAGATTC GCATCTCAGT AGTGGTGCGC GACACCGACC TCCCGCTCGC CGTGCGGGCC
GTGCACGGCG CCTTCGACCT GGGTGACCCG AACGGCGGGG CGATCGTGTA CGCGGGAACC
GGACGATGA
 
Protein sequence
MALLVAKFGG SSVADADRIK RVAERIVENR RAGNDVVVVV SAMGDTTDEL LDLAEQVSPL 
PPARELDMLL TAGERISMAL LAMAITTLGA EARSFTGSQA GVITDSVHGK ARIIDVTPGR
IRAALDSGAI AIVAGFQGVS QDTKDITTLG RGGSDTTAVA LAAALGADAC EIYTDVDGVF
TADPRIVPDA RRIDTISYEE MLEMAACGAK VLMLRCVEYA RRYSVPVHVR SSFSAKPGTW
VTEIPEEQLV EQAIIRGVAH DLSEAKVTVV GCPDKPGVAA AVFRAVADTD VNLDMIVQVG
SVAGSGRTDI SFTLPKADGR TALTALTKVQ SEIGFERTLY DDHIGKLSLI GAGMKSHPGV
SARFFGSLAD AGVNVEIIST SEIRISVVVR DTDLPLAVRA VHGAFDLGDP NGGAIVYAGT
GR