| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0224 |
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| Symbol | |
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| ID | 3906528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 263974 |
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| End bp | 264957 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877553 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_479342 |
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| Protein GI | 86738942 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.410647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGA AGATCGCGGT AACCGGAGGG TCGGGTTTCA TCGGCAGCCA TGTGGTCGAC
CGTCTGCTTG ACGCCGGTCA CGACGTTCTC TCACTGGACG TCGAACACCG GCCGGTCGAC
CCCCGGGCTA GTTACCAGCA CCTCGACGTG CTTGATCTGC CGGCGGTCAC CGCCGCGCTG
AGGGGCGTCG AGGCCGTCTT CCACATCGCG GGGATGTCCA ATGTGGACTT CGCGTTCGCC
GACCCGGTGC GCACCGTGCG GCTCAACGTC GAGGGCACCG GGAACATCTG CGAGGCGGCG
CGGCAGGTCG GGGTTCGCCG GGTGCTGTTC GCCAGCACCG TCTGGGTGTA CGGGGCGGTC
GGTGACCGGG CCGGTTCGGC GCCGCTGACG GAGGACGCCG AGATCACGCT GGGCCGCGCC
GGGCATGTCT ACACCTCGAC GAAACTGGCC GCCGAACTGC TGCTGCACAG CTATCAGCAG
ACCTACGGGC TGCCGTTCAC GATCCTGCGT TACGGCATCC CCTACGGCCC CGGAATGCGT
GACGAGCTGG TGCTGGCCCG CTTTGTCCGC AAGGCTCTGA ACGGCGAGTC GCTGACGGTG
GCCGGCGACG GTCTGCAGTT CCGCAACTAC GTTTTCGTCC GGGACCTGGC CGAGGCGCAC
GTGCTGGCTC TGACCCCCGA CGCGGCCAAC ACTACGCTCG CCCTCGAGGG CAGCGAATCG
GTCAGTGTGC TGGAGATGGC ACGGGCCGTC CAGGAGTACT TCCCCGGCAC CGCCATCGAA
CACATGCCTG CGCGCCCCGG GGACTTCCGC GGTCGGGAGA TCTCCGCGCA GCGGGCCGCG
GAGGTGCTCG GATGGCGACC GACCACACCC TTCTCGGAGG GTGTCCGGCA GTACATCGAG
TGGTATCTGG CAAATCGACG GCCTCCGGCT CAGGCGCTCC CGCCTGTCGG CGACCTCGAT
ATCTCCGCGG CCTCCTCGGA GTGA
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| Protein sequence | MTMKIAVTGG SGFIGSHVVD RLLDAGHDVL SLDVEHRPVD PRASYQHLDV LDLPAVTAAL
RGVEAVFHIA GMSNVDFAFA DPVRTVRLNV EGTGNICEAA RQVGVRRVLF ASTVWVYGAV
GDRAGSAPLT EDAEITLGRA GHVYTSTKLA AELLLHSYQQ TYGLPFTILR YGIPYGPGMR
DELVLARFVR KALNGESLTV AGDGLQFRNY VFVRDLAEAH VLALTPDAAN TTLALEGSES
VSVLEMARAV QEYFPGTAIE HMPARPGDFR GREISAQRAA EVLGWRPTTP FSEGVRQYIE
WYLANRRPPA QALPPVGDLD ISAASSE
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