| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0217 |
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| Symbol | |
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| ID | 3905384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 253701 |
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| End bp | 256295 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637877546 |
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| Product | RNA binding S1 |
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| Protein accession | YP_479335 |
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| Protein GI | 86738935 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.200236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACGA CATCTGTCCC GCAGCGTTCC ATCCATCAGC GGATCGCCGA GGAGCTCGGC
GTGCGCCAGG GGCAGGTGAC GGCGGCGGTC GACCTGCTCG ACGGTGGTGC CACCGTGCCC
TTCATCGCCC GCTACCGCAA GGAGGCGACC GGCACCCTCG ACGACACGCA GCTGCGCACG
CTGGAGGAAC GGCTGCGTTA CCTGCGGGAG CTGGAGGATC GGCGCGCCGC GATCCTCGAA
TCGATCCGGT CGCAGGGCAA GCTGGACGAC GCCCTGGAGG CGCAGATCCT CGCCGCCGAC
TCCAAGGCCC GGTTGGAGGA CATCTACCTG CCCTTCAAGC CGAAGCGGCG GACCAGGGCG
CAGATCGCCC GGGAGGCCGG CCTCGAACCG CTGGCGGAGA GCCTGCTGGG CGACCCCTCG
CTCGACCCGT ACGCCACGGC GACGGCCTAC GTCGATCCGG AGAAGGGTGT GGCCGACGCG
GGTGCCGCGC TGGAGGGGGC GCGGGCGATC CTCGTCGAAC GGTTCGCCGA GGACGCCGAC
CTGATCGGCA CGCTGCGCGA GCGGATGTGG TCGCGTGGTG TCCTGGTATC CCGGGTCCGG
GAGGGCAAGG AGGAGGCGGG GGCGAAGTTC TCGGACTACT TCGACTTCTC GGAGCCGTTC
ACCTCGTTGC CGTCGCACCG CATCCTCGCG GCGTTCCGGG GGGAAAAGGA GGAGATCCTC
GACCTGACCC TCGAACCGGA CGTGCCGGCG GAGCCGGACG CCGCCCCGCC GCCCGGGCCG
ACCGACTACG AGACGCGGAT CGCCGAGGCG TTCGGGATCT CCGACGCGGG CCGACCGGCG
GACCGGTGGC TCCTCGACAC GGTCCGCTGG GCCTGGCGCA CCCGCATCCT CGTGCACCTC
GGCATCGATC TACGGATGCG GCTGTGGACG GCCGCCGAGG ACACCGCCGT GCGGGTGTTC
GCGGCGAACC TGCGTGACCT GCTGCTCGCG GCGCCGGCCG GAACCCGGGC GACCATGGGT
CTCGACCCGG GGTACCGCAC CGGAGTGAAG GTCGCCGTGG TCGACCCGAC CGGCAAGGTG
GTCGCCACCG ACACCATTCA TCCGCACGTC CCGGCGCGGC GGTGGGACGA GTCGATCGCC
ACCCTGGCCC GGCTCGCCCG GGAGCATCGC GTCGACCTGA TCTCGATCGG GAACGGGACG
GCCTCCCGGG AGACCGACAA GCTCGCCGAG GACCTCATCC GCCGGCACTC GGAGCTGTCG
CTGACGAAGG TGACGGTCTC GGAGGCGGGG GCGTCGGTGT ACTCGGCGTC CGCCTACGCC
GCGGCGGAGC TTCCGGGGCT CGACGTCTCA CTGCGCGGGG CCGTGTCGAT CGCCCGGCGG
CTGCAGGACC CGCTCGCGGA GCTGGTGAAG ATCGACCCGA AATCGATCGG GGTTGGGCAG
TACCAGCACG ACCTGTCCGA GTCCCGGCTG TCGTCGTCCC TGGACGCGGT GGTCGAGGAC
TGCGTGAACG CGGTGGGGGT GGACGTCAAC ACCGCGTCCG CCCCGCTGCT GACCCGGGTG
TCCGGAATCG GGGCGAGCCT CGCGGAGAGC GTGGTGCGCC ACCGCGACAC GCACGGGCCG
TTCCAGACCA GGGCCGCCCT GAAGGACGTC CCCCGCCTCG GGCCGAAGGC GTTCGAGCAG
TGCGCCGGCT TCCTGCGCAT CCCCGACGGG GACGACCCGC TGGATGCCTC CAGCGTGCAC
CCCGAGTCCT ACCCGGTGGT GCGGCGCATC CTCGCGGCGA CCAGCGGCGA CCTCGGCTCC
CTCATCGGCA ACGGGGCGGT CCTGCGAGCC CTGAAGCCGA GCGAGTTCGT CGACGACACC
TTCGGCCTGC CGACCGTCAC CGACATCCTC GCCGAGTTGG AGAAGCCCGG CCGTGACCCG
CGGCCGGCCT TCAGGACGGC GGCATTCACC GAGGGGATCG AGACGCTCGC GGACCTGGTC
CCCGGCATGA CCCTGGAGGG GACCGTCACG AACGTCGCCG CGTTCGGGGC CTTCGTCGAC
ATCGGCGTTC ACCAGGACGG CCTGGTGCAC GTGTCGGCGA TGTCGAAGAA CTTCGTCAGC
GATCCGCGCG AGGTCGTCAA GCCCGGCGAC ATCGTGACGG TGAAGGTTCT CGACGTCGAC
ATCCCCCGCA AGCGGATCTC GCTGACGCTG CGGCTGGACG ACGAGGCCGG TGCCGGGGGC
CCGGGCCGCC GGGACGGCGA GGGTGACCGG CGGGGAGCCG CGGGTGCGGG CGCCGGACGC
GGCGGAAGCC GTGATCATGG TGATCGGCGG AATGGCGGCC GGGGCACCGC GAGTGCGGGC
GCCGGACGCG GCGGAAGCCG TGATCATGGT GATCGGCGGA ATGGCGGCCG GGGCACCGCG
AGTGGCGAAC GCGGTGGTGC CGGCGGGCGC GGTGCCGGTG GTGCCGGCGG GCGCGGTGCC
GGTGGCAGGA ACGGTTCCGG TGGCCGCGGT GGATCCAGCG TGCCGGACGG CGCGATCGCC
GAGGCGCTGC GCCGGGCCGG CATCGTCAAC GGCGACCAGA TCACTCTCGG TGAGTCCGGC
CGCAAGCGCG GCTGA
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| Protein sequence | MTTTSVPQRS IHQRIAEELG VRQGQVTAAV DLLDGGATVP FIARYRKEAT GTLDDTQLRT
LEERLRYLRE LEDRRAAILE SIRSQGKLDD ALEAQILAAD SKARLEDIYL PFKPKRRTRA
QIAREAGLEP LAESLLGDPS LDPYATATAY VDPEKGVADA GAALEGARAI LVERFAEDAD
LIGTLRERMW SRGVLVSRVR EGKEEAGAKF SDYFDFSEPF TSLPSHRILA AFRGEKEEIL
DLTLEPDVPA EPDAAPPPGP TDYETRIAEA FGISDAGRPA DRWLLDTVRW AWRTRILVHL
GIDLRMRLWT AAEDTAVRVF AANLRDLLLA APAGTRATMG LDPGYRTGVK VAVVDPTGKV
VATDTIHPHV PARRWDESIA TLARLAREHR VDLISIGNGT ASRETDKLAE DLIRRHSELS
LTKVTVSEAG ASVYSASAYA AAELPGLDVS LRGAVSIARR LQDPLAELVK IDPKSIGVGQ
YQHDLSESRL SSSLDAVVED CVNAVGVDVN TASAPLLTRV SGIGASLAES VVRHRDTHGP
FQTRAALKDV PRLGPKAFEQ CAGFLRIPDG DDPLDASSVH PESYPVVRRI LAATSGDLGS
LIGNGAVLRA LKPSEFVDDT FGLPTVTDIL AELEKPGRDP RPAFRTAAFT EGIETLADLV
PGMTLEGTVT NVAAFGAFVD IGVHQDGLVH VSAMSKNFVS DPREVVKPGD IVTVKVLDVD
IPRKRISLTL RLDDEAGAGG PGRRDGEGDR RGAAGAGAGR GGSRDHGDRR NGGRGTASAG
AGRGGSRDHG DRRNGGRGTA SGERGGAGGR GAGGAGGRGA GGRNGSGGRG GSSVPDGAIA
EALRRAGIVN GDQITLGESG RKRG
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