Gene Francci3_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0105 
Symbol 
ID3902939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp126483 
End bp127232 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID637877436 
Producthypothetical protein 
Protein accessionYP_479228 
Protein GI86738828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.529345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCGG ATGTCACTGT ACCGTTTTCC CTGGCCGTTC TCCTGGCTGA TTTCCGACCG 
TGCTTCACCG TGCCGACCTT CCGGGTTTTC CGCGCCCTGG TGGCCGGGAT GCTCGCGGCC
ACGGGCCGGC GCACGGTGTG CGGGATGCTC GTCGGCGCCG GGCTGTCGCG GGTGTGGCCG
CACGACCGGG TGCACCGGTT CTTCTCCGCC GCGGTCTGGT CCGCCGACGA GCTCGGGGTG
ACCCTGGCCC GGCTGGCGGT GCGCCTTCTG ATCCCCGCCG GGGCACCGGT GACCGTGGCG
GTCGACGACA CGCTGTTCCA CCGCAGAGGC ACCAAGGTCT GGGCCGCGAG CTGGTTCCAC
GACGGCTCGG CCGTCGACAC CCGCCAGATC GGCTACGGCA ACAACTGGGT CCTCGCCGGA
ATCATCGTCA CCCTACCCTG CCTCGACCGG CAGATCTGCC TGCCGGTGAT GGCCCGACTG
GTCCGCAAGG ACACCACATC GGCCTCCCGG CTGTGGCTGG CCGCCCGCAT GGTCGAGAAA
CTGGCCACCG CACTGCCCGG ACATACGATC CACGCCGTCG CCGACGCCGC CTACGCCGGC
GACGAGCTAC GCACCCTACC CGCCCCGGTG ACCTGGACCA CCCGACTACG CAAGAACGCC
GCCCTCGACG GTGGACTCGC GCAGGAACCT GCGGCGCCAG TACCGGTCGG CGCAGATCAG
CCAGGGGTCG GTGACGAAGT CCGCCGATGA
 
Protein sequence
MLPDVTVPFS LAVLLADFRP CFTVPTFRVF RALVAGMLAA TGRRTVCGML VGAGLSRVWP 
HDRVHRFFSA AVWSADELGV TLARLAVRLL IPAGAPVTVA VDDTLFHRRG TKVWAASWFH
DGSAVDTRQI GYGNNWVLAG IIVTLPCLDR QICLPVMARL VRKDTTSASR LWLAARMVEK
LATALPGHTI HAVADAAYAG DELRTLPAPV TWTTRLRKNA ALDGGLAQEP AAPVPVGADQ
PGVGDEVRR