| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1721 |
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| Symbol | polC |
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| ID | 5452210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1873793 |
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| End bp | 1877965 |
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| Gene Length | 4173 bp |
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| Protein Length | 1390 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640875490 |
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| Product | DNA polymerase III PolC |
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| Protein accession | YP_001411213 |
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| Protein GI | 154250388 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.670328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCACG TCTTTGATGT CCAGCGTCCA ATAGAAAATA TAGCTCAAAA GCTTGGAATA
AATGCCAGTG GTATTTTAAA AAAGGTTATT TACGATAAAA AAAGAGAAGC TGTTACTTTT
GTTATAGAAA ATTTTTCAGG AGATTCTGAA TACTTTAAAA ATGCTCTTAG TGAGTTCATA
GGAGTGCACA TAGATATTAC TTTTGAAAAC ACAATTAATG AATCAAGTCA GAGTATAGAA
GAATTTATTT ACAAACAGTT GAATGGTTCT GGAAAATATA TAGATAGGAT AGAAATCATT
GGTAAAAGCT TAAAGATATA CACAATTGGT GAGTTCGCAA AATCTCATGT CATGAACAGA
ATAAAAAAGG TAAAAAACAC ATTACCTTTT CAAGAATATA TTATTGAGAC TGTGCAGGAA
AGCATACAAC ATTCAGAACA GTTGATTCAA AATACAGAAA TTGTTCAGAA CGTAGAACAA
AGAAATTCTG AATTTAATAG TATAAAAGGC GATGTCGAGG AGAACAATAA AATCGAAAAA
AATGATGAAA GCGAACTAAA AAAAGTTTTA AACTCAATAT ACTCTCCATC TACGTTGGTT
TTATCACCAA ATTCCAAGAG ACAGATAAAA GTTTATGGTA AAGTGTTTAA ATTCGAGAAA
ATAAACGATG ATTTATCAAC AATATATATA ACAGACAAGA AAGATTCGAC CATTTTAAAA
GTTTTCGATT CCAGAAAATT GGCAGTAGAA GAAAAAGTTA ATGTAGGAAG TTGGTATATA
TTCACAGGTA AAGTTCTTAC AGATAAGAAC AATTCCCCAT TTTTAAAAGT GGAGAATATT
ACAGAAATCC CATCTTTAGA TAGGGTTGAC AACGCTGTAG AAAAAAGAGT AGAACTCCAC
GCACATACAA AAATGAGCGA TCTTGATAGT GTAATGGACA TCTCAGAGTA CGTGAGCACA
GCAAAAAAAT GGGGATGGGA AGCTATCGCG ATTACCGACC ACGGTAATGT CCAAGCCATT
CCAGAATTTT TTGATATTGC AAAATCAGCA GGTTTAAAAC CAATATTTGG CTCGGAACTT
TATTTGGCTA ATGATCCCAA AAGGATAATG ATGAACGAAA TAGAAGGCAA CGTTGACGAT
TATACTTATG TTGTACTTGA TTTGGAGACA ACAGGCTTAA ACCCTCGTTC TGACGAAATA
ATGGAGATTG GTGCAGTCAA AACAAGAGAT GGAAAAGTTA TAGATGAATT CCACACATTT
GTTAGGCCTA ATAAATTAAA TAAGAAAAGT CTTAATATAA CAGGTATTAC AGAAGATATG
CTAAAAGATG CTCCTGATAT AATGCAAGTC TTGCCAAAAC TATTAGAATT TATAAAAGAC
AGCATATTAG TTGCTCATAA CGCTGATTTC GACATGACGT TTTTAAAGAA TATCCTTTCA
AAAAGTGGAA TTGAATTTAA CCCGCCGTAT ATAGATACTC TCAGACTCTC GCAAGCATTA
CTTAGGAATA AAATTAAATC ATTCTCTCTC GATAAACTTG TTGACCATTT TGGGTTAGGT
GCTTTCCAAC ATCACAGGGC GTTAGACGAT GCCAGGGTAA CCGTAAATGT TTTCTGGAAG
TTAATAGAAT TGGCTAAGAA AAAATCTATA ACAACGTTTG AAAAATTGAA CAAATTAGTT
GAAAATATAA ATCCACTTGT AAAACATCCT CAGCATGTGA CCGTTCTTGT CCGAAACAAA
ACAGGGCTTA AGAATTTGTA TAAATTAATC TCAAAAGCTC ACACTGAGAC ATTTTTTGTT
GTTCCTCAAG TATTGAAATC TGAGCTTGAA AAACACAGGG AAGGCTTACT CATAGGTACT
GGTTGTGCAA ATTCAGAGAT ATTTGAGCTT GCCCTCCAAA GAGACACAGG CGCGTTAACA
GAAGCGCTTA AATTTTACGA TTACATTGAA ATAATGCCAC TTGATACTAT AAATTCCGAA
GAATTTACCA GAGAAGAAGC CAAAGAAGCG TATAAATTGC TTTATCAGGT TGGTAAAGAA
TTAAACATGC CTGTTGTAAT GGTTTCAAAT GCTCATTTTA TCGACCCAGA GGATATAAAG
GCACGTAAAG TATTGCTTGC ACCTCAGAGT AATATAGAAG ATGAAGAGGC AAACTATTAT
CTTAGAACAA CGCAGGAAAT GATAGATGCC GCTTTAGAAA TTTTTGAAGA TGAACAAATT
GCTAAAGAAG TTGTTGTCGA TAATCCAAAG AAGATTGCAA ATATGATAGA TACAATTCAA
CCACTTGAAA AGAAACTTCA TCCACCAAAG ATAGAAGGCG CAGAGGAAAA ACTTCGAACA
ATGACTTACG AAAAAGCTTA TCAACTATAT GGGAACCCGC TTCCGGAAAT CGTTGAGAAG
AGAATTGAAA AAGAACTTAA CAGCATAATT GGACATGGAT ATGCTGTATT GTATATGATA
GCTCATCTCA TAGTCAAAAA AGCTGGTGAA GATGGATACG TTGTTGGTTC TCGAGGTTCC
GTTGGTTCTT CATTGGTTGC ACACCTTGTT GGAATAACGG AAGTAAATCC TTTACCGGCC
CACTACAGAT GCCCAGATTG TAAATATTTT GAATTACACG AAGAGTTTGG TTCAGGTTAC
GATTTGCCAG ACAAACTTTG TCCAAAATGT GGCGCAAAAC TTGAAAAAGT TGGGCAAGAC
ATACCATTTG AAGTCTTCAT GGGATTTGAA GGAGACAAAG TGCCTGATAT AGACTTAAAT
TTCTCTGGCG AATATCAAGA AAGAGCGCAT AAGTTCATAG AAGAATTATT TGGAAAATCG
AAAGTTTTCC GTGCTGGAAC AATAAGTACC ATAGCCGATA GGAGCGCTAT TGGTTACGTT
AAAGCCTATA TGGAAGACAA AAATGGAAAT ATAGTTAATC CGCTAAATCC TGCTGAACAA
GAACGACTTA CAATGTACGT AACGGGTGTA AAGAGAACAA CAGGACAACA CCCCGGTGGA
TTGATGATAG TTCCAAATGA GTACGAAATA TATGACTTTA CGCCATTCCA ACATCCGGCG
AACGACAAAA AATCAGGAGT ATATACCACG CACTTTGCTT ACGAATTTAT CCACGACGAT
TTAATAAAAT TGGACGCGCT TGGTCACGAT GACCCTACGA TGATTCGTTT ACTTTACGAA
TACAGCGGAA TAGACCCCAT GACAATACCT ATGGATGATA AAAAGACTAT AAGCATATTC
TCATCGACAA AAGCTTTGGG AGTTGATCCA GAAGAACTTG GAACAGACGT AGGAACTATA
GGCATTCCGG AATTTGGCAC AGATTTTGTT ATGGGCATGC TCAGAGAAAC AAGGCCAAAG
ACATTCGCTG AACTTGTTAG AATATCAGGA CTTTCTCACG GAACAGATGT TTGGCTTGGT
AATGCGCAGA CACTTATCAA CAAAAAAATA GCGACACTGT CTGATGTCAT ATCCTGTCGT
GATGATATAA TGATTTATCT TATTCACAAA GGGGTACCGC ATTCAAATGC ATTTAAGATA
ATGGAAAATG TTAGAAAGGG GAAAGGATTG AAAGAAGAAG AAATAAACAT AATGAAAGAA
CACAATGTAC CGGATTGGTT CATTGAGTCG TGCCAAAAGA TAAAGTATCT TTTCCCAAAA
GCACACGCAG TTGCTTATGT AAGTATGGCG TTTAGAATTG CGTACTTTAA AGTTCACTAC
CCATTGGCAT TTTATGCGGC GTATTTTTCA ACTAAAGGTG ATGAATTCGA TGCAGAGCTC
ATTTTAAAAG GCAAGGAGGC TATAAAGAAA AGACTCGTCG AATTGGCAGC TAGTATGAAG
AAGGACGTTA AAGAAAAGAA TGAAGAAAAA GTCTTACAAG CAGCACTTGA AATGCTATTG
CGTGGGTATG GATTTAAGAA ACCTGACTTG AAACGTAGCG ACGCGAAAAG ATTTATAATA
GACGGCAAAG ATTTACTCAT ACCGTTCAAC AAAATACACG GAATAGGCGA AAACGTTGCA
AACTCTATAG TAGAAAAGCG TGCCGAAAAA CCGTATACAT CTATTGAAGA TTTAATGAAT
CGTGCACGTG TTACAAAAGC ACAAGTCGAG GTATTAAAAA GAATAGGAGT ATTAGATGGA
CTTCCAGAAA CCGACCAAGC TATGTTGTTT TAG
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| Protein sequence | MIHVFDVQRP IENIAQKLGI NASGILKKVI YDKKREAVTF VIENFSGDSE YFKNALSEFI
GVHIDITFEN TINESSQSIE EFIYKQLNGS GKYIDRIEII GKSLKIYTIG EFAKSHVMNR
IKKVKNTLPF QEYIIETVQE SIQHSEQLIQ NTEIVQNVEQ RNSEFNSIKG DVEENNKIEK
NDESELKKVL NSIYSPSTLV LSPNSKRQIK VYGKVFKFEK INDDLSTIYI TDKKDSTILK
VFDSRKLAVE EKVNVGSWYI FTGKVLTDKN NSPFLKVENI TEIPSLDRVD NAVEKRVELH
AHTKMSDLDS VMDISEYVST AKKWGWEAIA ITDHGNVQAI PEFFDIAKSA GLKPIFGSEL
YLANDPKRIM MNEIEGNVDD YTYVVLDLET TGLNPRSDEI MEIGAVKTRD GKVIDEFHTF
VRPNKLNKKS LNITGITEDM LKDAPDIMQV LPKLLEFIKD SILVAHNADF DMTFLKNILS
KSGIEFNPPY IDTLRLSQAL LRNKIKSFSL DKLVDHFGLG AFQHHRALDD ARVTVNVFWK
LIELAKKKSI TTFEKLNKLV ENINPLVKHP QHVTVLVRNK TGLKNLYKLI SKAHTETFFV
VPQVLKSELE KHREGLLIGT GCANSEIFEL ALQRDTGALT EALKFYDYIE IMPLDTINSE
EFTREEAKEA YKLLYQVGKE LNMPVVMVSN AHFIDPEDIK ARKVLLAPQS NIEDEEANYY
LRTTQEMIDA ALEIFEDEQI AKEVVVDNPK KIANMIDTIQ PLEKKLHPPK IEGAEEKLRT
MTYEKAYQLY GNPLPEIVEK RIEKELNSII GHGYAVLYMI AHLIVKKAGE DGYVVGSRGS
VGSSLVAHLV GITEVNPLPA HYRCPDCKYF ELHEEFGSGY DLPDKLCPKC GAKLEKVGQD
IPFEVFMGFE GDKVPDIDLN FSGEYQERAH KFIEELFGKS KVFRAGTIST IADRSAIGYV
KAYMEDKNGN IVNPLNPAEQ ERLTMYVTGV KRTTGQHPGG LMIVPNEYEI YDFTPFQHPA
NDKKSGVYTT HFAYEFIHDD LIKLDALGHD DPTMIRLLYE YSGIDPMTIP MDDKKTISIF
SSTKALGVDP EELGTDVGTI GIPEFGTDFV MGMLRETRPK TFAELVRISG LSHGTDVWLG
NAQTLINKKI ATLSDVISCR DDIMIYLIHK GVPHSNAFKI MENVRKGKGL KEEEINIMKE
HNVPDWFIES CQKIKYLFPK AHAVAYVSMA FRIAYFKVHY PLAFYAAYFS TKGDEFDAEL
ILKGKEAIKK RLVELAASMK KDVKEKNEEK VLQAALEMLL RGYGFKKPDL KRSDAKRFII
DGKDLLIPFN KIHGIGENVA NSIVEKRAEK PYTSIEDLMN RARVTKAQVE VLKRIGVLDG
LPETDQAMLF
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