| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1700 |
|---|
| Symbol | |
|---|
| ID | 5451687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1850838 |
|---|
| End bp | 1851596 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640875469 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001411192 |
|---|
| Protein GI | 154250367 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1856] Uncharacterized homolog of biotin synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG CAATTGGTAT AGACCCATCA AGCACACTTC CAATATCTGT TACAAAATCA
TGCCCTATGA ATTGTGGACA TTGTGGTGGG CATTATATAA AACATATGGT GCATATAGAT
GATATTGAAA AGTATTTAGA CAGGTACAAT TCTTTTCTTG TAAGCGGTGG TATGTTCCCA
AGTGGCGAGA TACCTTTCAA GCCTTATCTT GAAAAACTTC GCCAGTTGAA AGAAACTCAT
GATTTAAAAT ATAATTTTCA CATAGGATTT CCAAAAAATC CACCATATGA ACTTGAGGGA
ATCGCCGATG TTATTAGTTT TGATTTCTTT GGCGATAAAG ATGTACTTAA AGAACTTTAC
GGCATAGATA GAACACCTGA AGAAATATTG GATTCTATAT TGCCTTTGAA TGTGAAAAAA
GTACCGCATG TAACAATAGG TGTAATATGT GGTAAAATTA CACATGAACC AAAGGCTATA
GATATTCTCT CTGAATATTT CAATTCAATT GTTCTTAACA TTTTCATACC AACTACCGGT
ACGAAATACA GTGACTGCCA ACCACCATTA CTTGAAGAGG TGGAGAAAAT TTTTGATTTG
GCTTCAAAAA AGTTTGAGAA AATAACATTA GGTTGTATGC AACCAAAAGG AGATTATAGA
AAAAAATTAC AAGAAATTGT GTCAAATTAC GCAAATTTTA TAGTAAAACC TTTTGATAAG
AATTATGCTT TTGACGGTTG TTGTGCGTTT TATCAATAA
|
|---|
| Protein sequence | MKSAIGIDPS STLPISVTKS CPMNCGHCGG HYIKHMVHID DIEKYLDRYN SFLVSGGMFP
SGEIPFKPYL EKLRQLKETH DLKYNFHIGF PKNPPYELEG IADVISFDFF GDKDVLKELY
GIDRTPEEIL DSILPLNVKK VPHVTIGVIC GKITHEPKAI DILSEYFNSI VLNIFIPTTG
TKYSDCQPPL LEEVEKIFDL ASKKFEKITL GCMQPKGDYR KKLQEIVSNY ANFIVKPFDK
NYAFDGCCAF YQ
|
|---|
| |