Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1619 |
Symbol | |
ID | 5452754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1767466 |
End bp | 1768362 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640875392 |
Product | integrase catalytic region |
Protein accession | YP_001411115 |
Protein GI | 154250290 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCAA GCACATTTTA CGCAACAACA CGAACGTTCT TTTCAATAGA TTGGATAAAG GGAAAGAGCA AAAGAAGATG CAAAGGCTAC TCAACAAAGG TAACAGGGGA AACAATCAGC GACGAAGAAA TAGAGGGACT TTTAGTTACG ATATACGAGA ATGAGAACTG TAATGATCCA GAATACTACA TCAAGACACT TGGAGACAAG AAGCTCTCGA AAGTACTGAA GAGAAGATAC GGAATAATAG TAAATCACAA GAAAATATAC AGAATGAGGA AAGAACTCGG ACTAATACGT AAGTACAAGA AACATGCAAA ACATCCAAAG AAAAGGCCAA AGGATCATGA AATAGGAGAG ACAAATAGAT ATTGGGAAGC AGACATTAAA TTCATACCGA CAAAGAAAGA CGGATACGTA CCGATGCTTG ACATAATAGA CGTGAGAGAC AAAACGATAG TAGGGACACA TTTGGGACAG AAGAGCAAAT CGAAGAACTT CATAGAATGC ATAGAAAGAG CGATAGAATA CAGGAAAGTA GATACGAAGA AACTGACGAT AAGGACAGAC AATGGGCCAC AATTCAAATC AAAAGCAACG GAAGGATACC TGGAAGAAAT GGGAATAGAG CATGAATTTG GATACAAGAA CAATCCAAAC AGCCAAGCAT ACATAGAGTC ACATCATTCA GTAGTAGAGA GAGAATTCGT ACAAATGAAT GAATTTGAGT ACATAGAAGA CGTATACAAT GCATACAAAG CATACATATA CTTCTACCAA GAGATAAGGC CGCACGGATC ATTAGGATAT ATGACACCGA GCGAATATGA TGAACTATTA AACGAGCAAG AAAGTAGGAA AGGCGCAATT AACAGAGTGG TGGTTGTGAA AAAATGA
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Protein sequence | MSSSTFYATT RTFFSIDWIK GKSKRRCKGY STKVTGETIS DEEIEGLLVT IYENENCNDP EYYIKTLGDK KLSKVLKRRY GIIVNHKKIY RMRKELGLIR KYKKHAKHPK KRPKDHEIGE TNRYWEADIK FIPTKKDGYV PMLDIIDVRD KTIVGTHLGQ KSKSKNFIEC IERAIEYRKV DTKKLTIRTD NGPQFKSKAT EGYLEEMGIE HEFGYKNNPN SQAYIESHHS VVEREFVQMN EFEYIEDVYN AYKAYIYFYQ EIRPHGSLGY MTPSEYDELL NEQESRKGAI NRVVVVKK
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