Gene Fnod_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1417 
Symbol 
ID5451749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp1534232 
End bp1535422 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content38% 
IMG OID640875190 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 
Protein accessionYP_001410918 
Protein GI154250093 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTG AATTGGGTAT TTTGAAGGAT TTGAGGGAGT ATTTTCTTTC GGGTAAACCA 
CTTATATTAA TTGATGAGAA TAGAGAAAAA GAAGGGGATT TTGTTTATCC AGCCGAGCTT 
ATCGATGAGA GTATGGTTGA ATTTTTTGTC AGGTATGGTA AAGGGCTTTT TTGTTTGGTT 
GCACCGGAAG GTGATTTACT GAGCAGAGGA TTTTTCAAGT TGCCCACGAA TTACGGCGCA 
AATTATTTTA TTCCAATAGA TTTTGGTGAT GGTACAGGGA TAAGTGCGTA TGAAAGGGCG 
GTAACTTGCA GGGCGTTGGC TAATAGAGAC AAAAAAATAA GTGAATTTAG GTATCCAGGT 
CATGTGATGT TGATTGGTTC GCAGGATTTT TCCAAAAGGC GTGGGCACAG CGAATCTTCG 
GTTGAGCTCA TGAAAATGTG TGGATTTAAG CCTTACTCTG TTATTGTTGA AATTTTAAAC 
GAGAGAGGCG ACTCGCATGA TTTTGATTAT TTAAGTAAAT TAGCTGAGAA GTTTGAATTG 
AAGACTATGA GTATTAAAGA TGTATGGAGA CTTTACGTTT TAAGTAATGA ACTTATCAAG 
ATTAAATCCA CTGCGAAATT ACCAACCGAA TATGGGATAT TTGAAATTGT TTCTTTTGAC 
AATAAATTAG ATTACAAAGA GCATTTTGCG CTTGTTAAGC GATGGCAAGG TGTGCCACTT 
GTAAGGATTC ACTCTGAATG TGTGACTGGC GATTGCTTAT CTTCTCTAAG GTGTGATTGC 
GGCTCGCAAC TTGGTAAAGC TTTGAAGATG ATAGAAAAAG ATGGAGGAGT GCTTATTTAC 
CTTAGGCAGG AAGGGAGGGA TATAGGTTTA AGCGCAAAAA TAAGTGCTTA TGAACTTCAA 
GATAAAGGGT TGGATACGTA CGAGGCGAAT GTAAAACTGG GGTTTAAACC TGACCAGCGC 
GATTATGCAG CGGCAAGTCA GATATTAAAA GCACTTGGCA TTGATAAAGT AAGGCTTTTA 
ACGAATAATC CAAACAAGGT TAAGGCTTTA GAAAGTTATG GGATAAGCGT CGTTGAACGT 
GTGAGCCTTT ATGGGAAAGT AACGAAATTC AATGTGAGTT ATCTAAAGAC TAAGGTAGAA 
AAATTTGGTC ATTTGATAGA GATTGAAGGG TCAAAGGAGG TCAATTTATG A
 
Protein sequence
MSIELGILKD LREYFLSGKP LILIDENREK EGDFVYPAEL IDESMVEFFV RYGKGLFCLV 
APEGDLLSRG FFKLPTNYGA NYFIPIDFGD GTGISAYERA VTCRALANRD KKISEFRYPG 
HVMLIGSQDF SKRRGHSESS VELMKMCGFK PYSVIVEILN ERGDSHDFDY LSKLAEKFEL 
KTMSIKDVWR LYVLSNELIK IKSTAKLPTE YGIFEIVSFD NKLDYKEHFA LVKRWQGVPL 
VRIHSECVTG DCLSSLRCDC GSQLGKALKM IEKDGGVLIY LRQEGRDIGL SAKISAYELQ 
DKGLDTYEAN VKLGFKPDQR DYAAASQILK ALGIDKVRLL TNNPNKVKAL ESYGISVVER 
VSLYGKVTKF NVSYLKTKVE KFGHLIEIEG SKEVNL