Gene Fnod_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1378 
Symbol 
ID5453268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1486127 
End bp1487194 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content38% 
IMG OID640875154 
Productsuccinate--CoA ligase (ADP-forming) 
Protein accessionYP_001410882 
Protein GI154250057 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00172923 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTC AAGAGTATGT GGGGAAAAGA CTTTTGAGCG AACATGGTTT TTATGTACCA 
AGGAGCTTAT TTGTCAAAGA AGAGGATATC GATTCGAAGG AACTCACTCA AAAGATTTTG
GAGCTCGGCT TTCCACAGGT TTTGAAATCT CAGGTTCTTG TTGGAGGAAG GATGAAAGCT
GGAGGGGTAA TCATCGCAAA GAACTTGGAA GAAAGTATGA GAGCGTTGCG AGAGCTTGTG
AATAAAGAGA TAAAAGGTGA AATGCCGGAA GGAGTATTGA TTGAAGAATT TGTGAAACAC
GACAAAGAGT TGTACTTTGG TATTACGATC GATAGGACGA ATAGAAATAT ATTGATGATT
TATTCTGAGT TTGGTGGTGT TGATATAGAG GAAGCATCAC GAATGTTTCC AAATAAGGTT
TTGAAAACTT ATTCATTTAA CGATTTACCG GAAGAATTTA AAGAGACCGC CAAGGTATTG
TTGGATATCT TTAAAAAACT TGACTTAACG CTTTTAGAAA TCAACCCAAT TGGAGTTACC
AAAAGTGGTT ATGTGATGCT TGATGCAGTA ATGCATGTTG ATGATAATGC ATTATTTAGG
CAAAGTTGGG CGATGGAGCA GATGAATGAA AGAGAAAATG ATATGGTGTT ACTCGGCGGT
TCGTATGGGG TTATAGGTTG TGGCGCAGGA ATTGTTATGG CAACGATAGA TATGTTAAAA
GAATTTGGTT TTGAGCCTGC CAATTTTTAC GACGTTGGTG GTGGCGCGAC CCGTGAGAAT
GTTTTGGAAG CACTGAAAAA GGTTTCAAGA ATTTCTAAAA AGATAGTGCT TAATATTTTT
GGTGGCATAA CAGATTGCTT CCAAGTTGCT GAGGCGATAG TTTTGTTTAA AGAAAGACAT
CCGGATGTCG AACTGTTTTT AAGGATTTCT GGGAATAAGG AGGAAGAGGC AAGAGCGTTA
CTTAGTAATA TTGGTTTGAC AGCTGTTAGT GATATGAACG AATTGATAAT GTTAATCCAG
AAAGAAGAGG CAAAGAAAAA GGAGTTGATG AAAGATGTTC TTTTCTAA
 
Protein sequence
MKIQEYVGKR LLSEHGFYVP RSLFVKEEDI DSKELTQKIL ELGFPQVLKS QVLVGGRMKA 
GGVIIAKNLE ESMRALRELV NKEIKGEMPE GVLIEEFVKH DKELYFGITI DRTNRNILMI
YSEFGGVDIE EASRMFPNKV LKTYSFNDLP EEFKETAKVL LDIFKKLDLT LLEINPIGVT
KSGYVMLDAV MHVDDNALFR QSWAMEQMNE RENDMVLLGG SYGVIGCGAG IVMATIDMLK
EFGFEPANFY DVGGGATREN VLEALKKVSR ISKKIVLNIF GGITDCFQVA EAIVLFKERH
PDVELFLRIS GNKEEEARAL LSNIGLTAVS DMNELIMLIQ KEEAKKKELM KDVLF