| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1370 |
|---|
| Symbol | |
|---|
| ID | 5451781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1479660 |
|---|
| End bp | 1480544 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640875146 |
|---|
| Product | cobalamin biosynthesis protein CobD |
|---|
| Protein accession | YP_001410874 |
|---|
| Protein GI | 154250049 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATAA ACGAAAAGGT TTTAGTGTTT TTACTTGCTT TGATAATTGA TTTATTTTTC
GGGGAGTTTC CTAGTGTTAT CCACCCAGTT GTTTACATGG GACGTGTGGG AAAGTTTTTC
GATAATATTT ACAAATCGAG AAGTTCAAAA GCTGTTTCTT TTGTTCTTGG AATGATTTCT
CTAATCGTAG AGTTGATTAT TTGGGGAGGA TTAGGATACT TTCTCCAAAG TTTTTCAAAA
AGATTCACAA TAGCGATGAT TTTTGAGGTT TGTATTCTCA AATCCACATT TTCTATCAGG
TCACTTTATG AGCACGTAAA ACGATGTTAT ACAAATGATG TTGAGTTATT GAGAAAGAAT
GTTTCTATGA TAGTCTCGCG TGATACTTCA AAGCTTGATA AGTCTCATCT TTACTCTGCG
GCTGTTGAGA GTCTCGCTGA GAATATATCC GATAGTATTA CTGGACCTTT GTTTTATTAC
GTGCTGTTTG GTTTACCTGG AGCGGTTGTT TACCGTGTTG TGAATACATA CGATGCGTTG
TTTGGCTACA GAAACGCAAG GTACGAATGG TTTGGCAAGT TTCCCGCGCG GTTTGACGAT
TTGCTTAATT TGGTACCGTC TAGGTTGACC GCGTTGTTTA TATCTTTCTT CAATTTTAAA
CGTTCTTGGG AGTATATCAA AAAGTATGGT GGGATAAAGA TTAACGCGAC TTATCCGATG
AGCGCTTTCG CTGGAGTGCT CGGTTTAGGT TTTGAAAAGA TTGGTTATTA CAAATTCGAT
GGGAAATTAC CAGATATGGA AGATTTGGGA AAAGCCCTTA GATTGTACAA AAAGGTTGTT
TTTCTGATAA TTTTGGTGGT GGTTTTTTCA TGCATGGTGG TATAA
|
|---|
| Protein sequence | MGINEKVLVF LLALIIDLFF GEFPSVIHPV VYMGRVGKFF DNIYKSRSSK AVSFVLGMIS
LIVELIIWGG LGYFLQSFSK RFTIAMIFEV CILKSTFSIR SLYEHVKRCY TNDVELLRKN
VSMIVSRDTS KLDKSHLYSA AVESLAENIS DSITGPLFYY VLFGLPGAVV YRVVNTYDAL
FGYRNARYEW FGKFPARFDD LLNLVPSRLT ALFISFFNFK RSWEYIKKYG GIKINATYPM
SAFAGVLGLG FEKIGYYKFD GKLPDMEDLG KALRLYKKVV FLIILVVVFS CMVV
|
|---|
| |