Gene Fnod_1327 details

Gene Information

• Locus tag: Fnod_1327
• ID: 5451760
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 1431663
• End bp: 1432076
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640875103
• Product: S-adenosylmethionine decarboxylase related
• Protein accession: YP_001410831
• Protein GI: 154250006
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1586] S-adenosylmethionine decarboxylase
• TIGRFAM ID: [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGTT TGGGTAGACA TATTATCGCA GAATTTTACG ATTGTGACAA GGAAATGCTC 
GATAATATTG ACGCAATCGA GTTTCATATG AAACAAGCAG CTTACGAAAC TGGTGCGACA 
ATAGTTAATT CTTCTTTCCA CCGGTTCCTC CCCTACGGAG TAAGCGGTGT GGTAGTAATA 
AGTGAGTCAC ATCTTACGAT CCACACATGG CCAGAGTACG GTTACGCAGC GGTTGACTTG 
TTCACATGTG GTGACCATGT CGACCCATGG AAAGCTTTTT CTTACTTAAA GAAGATATTC 
AAGTCGCAAA GGGCACATGT CGTTGAGCAC CTTAGAGGAA AATACGATGA AGTCGGAATT 
CCTGAAAACG CACCACATAA AGCTGTTGAA GCAGAAATGG CAGAAATATT CTAA 

 

Protein sequence

MKSLGRHIIA EFYDCDKEML DNIDAIEFHM KQAAYETGAT IVNSSFHRFL PYGVSGVVVI 
SESHLTIHTW PEYGYAAVDL FTCGDHVDPW KAFSYLKKIF KSQRAHVVEH LRGKYDEVGI 
PENAPHKAVE AEMAEIF