| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1203 |
|---|
| Symbol | |
|---|
| ID | 5451809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1295690 |
|---|
| End bp | 1296793 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640874979 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_001410707 |
|---|
| Protein GI | 154249882 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0971789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGT TCACTGTCAG TAAATCGGAA ATTGAAAAGA AAATCTCAAT TGCTTCTTCA
GCAATCGGTT CACGAACGGT TGATCCTATT CTCCAATGTT TACTTTTTAA ACCATTAAAT
GGGCATATAA ATATATACGC AACGGACTTG CAAACTTCTG TTATTTCTCA GGTTCAAGTT
GGAGAATATG AAGGTAATGA TGCTTTTGCA GTAGATGCTG AATTAGTTGA TGATATTGTC
CGAAATTTGC CAGAAGATGA GTTTATATTC GAATATAGCA ATGGGAAATT GTTGGTTAGA
AGCGGGAAGG CAAAATATAA TATTACAACG GTTTCAGATA TAGAAAGATT TCCTATAGTC
GACACAGATG AAAGTGGAAT AAAATTTTCC GTAGAAACTT CCATACTTGA GGAAATGTTG
GATAAAGTCA GTTTTTGTGC TTCGAGCGAG AGCGCAATGA GGGCTTTGAA TGGTGTGTAT
TGGGAAATTC ACGGTGGATT TTTGAGGTTG GTAGCAAGTG ATGGTTACAG ATTAGGGTTA
GCAGAGCAAA AATTAAACTT AGAAAACGAA TTTGATTTTA TAATCGCACT CAAAAGTATA
AAAGAGTTGG AAAAGCTTTT ATCCAGTACA ACAGAACCGG TAATAAATAT AACGTACGAT
CATTCTCTTG TATCATTTAA CGCAGGTGAT GTAACAACTA TCGTTAGAAC CGTTGAAGAA
ACATTCCCAG ATTACAAACG CGTATTGCCA AAGGCGTTTA AGACCAGAGT GATTTTAAAT
TTAGATGATT TTTCAGAGGC ACTAAAACGT GTAATGGTAA TATCAAAGAG AGGAAACGAG
AAAGTTCAAC TAAAAATAAC AGACGATTTA ATGGAACTTA CAAGCCAAAG TTCTGACTTT
GGGGAGGCTG TTGAAAGTAT TCCAATAACA AAAGATGGAG AAGATCTTAT AGTTAACTTC
AACCCCAAAT TCCTAAATGA GCCGTTAAAG CATATCGATG AGAAAGAAAT CGAATTTAAC
TTTGTTGACA ATCTTAGCCC ACTTCAGATA AATCCAAGAA ATGTAGGAGG TTATATATAC
ATTGTTCTAC CGGTAAGAGC ATAG
|
|---|
| Protein sequence | MLKFTVSKSE IEKKISIASS AIGSRTVDPI LQCLLFKPLN GHINIYATDL QTSVISQVQV
GEYEGNDAFA VDAELVDDIV RNLPEDEFIF EYSNGKLLVR SGKAKYNITT VSDIERFPIV
DTDESGIKFS VETSILEEML DKVSFCASSE SAMRALNGVY WEIHGGFLRL VASDGYRLGL
AEQKLNLENE FDFIIALKSI KELEKLLSST TEPVINITYD HSLVSFNAGD VTTIVRTVEE
TFPDYKRVLP KAFKTRVILN LDDFSEALKR VMVISKRGNE KVQLKITDDL MELTSQSSDF
GEAVESIPIT KDGEDLIVNF NPKFLNEPLK HIDEKEIEFN FVDNLSPLQI NPRNVGGYIY
IVLPVRA
|
|---|
| |