| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1144 |
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| Symbol | |
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| ID | 5451825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1229260 |
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| End bp | 1231269 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874914 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001410648 |
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| Protein GI | 154249823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00833327 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAC TTAGAGACTT GAGAGATTAT TTGAAAACAA AAATTACCGG AAAAACACTT
TACGCTTTAC CTAAGCAATG GTTTATTTCT CATTATGCTG GAAAGGTTTC CATTAAAGAT
GGGCGCTATT TCGTTGATCC ATACGAATAT TTTGCCTTCT TAATCGATTA TATCCTTGAA
AATGATAAAG GATTCGATTA TTCAAAATCT TTAGCAATGT TAAATGGTGA GGTAAAACCT
ATTTGGATTG GTAAAGGTAA GATATACGGC GCCCTTCCAA GAGCTACAGC GGCTTACAAC
CACAAAGGAT TTGGTGCTTT TGAACCAGAA GATATTTTCG GTTACAAAGA ATCTGGAACG
TTTTTAAAGA TGATAGCGTT GTTACCATAT TTGAAAAACA TGGGAATCAA TATTTTGTAT
ATGCTCCCTA TTTCGAAAAT GAGCAACATT TTCAAAAAAG GTGAGGTTGG TTCACCGTAC
GCGGTTAAAA ATCCTGTTGA GCTTGATGAA AGCTACCATG ACCCACTTCT TGAAGGAATA
TCTATTGATG AGCAATTTAA AGCACTTGTT CAAGCGGCGC ATATGCTTGG TATACGTGTT
GTGCTTGATT TTATACCAAG AACTGCCGCA AGGGATAGTG ATTTAATAAA AGAACACCCA
GATTGGTTCT ATTGGATAAG GATAGAAGAA GTGGCAAGTT ACAAACCACC ACACATACCT
GAATTACCTT TTAAAATACC AGATCCAGCA GATTTATCTG TAATATATTC AAATGAAGAA
GTTAAACAAC ATCTTGCAAA ATTCACGCTT CCACCAAACA AGTTAGATCC AAAGAAATGG
CAGAGAGTTA AGAAGATGGA AGGCGATATC CTTTCAAATA TCGCTCGTGA GTTTGGAATT
ATTACACCTC CAGGCTTTTC CGACTGGGTA AATGATCCTC AACCAACTTG GGACGATGTT
ACATTTTTGA GATTGTATTT GGATCATCCA GCGGAAAGTC AGAAATACTT ACCGGAAAAC
CAACCACCTT ATGTTTTATT TGATGTTGTT AAGTCGAGTA AATTCCCAGG TAATGAACCA
AATATGGAGT TATGGGAATA TCTTTCAGAT ATAATTCCGT CTTACCAAAA AAGATTTGGA
ATAGATGGAG CAAGGATTGA TATGGGACAT GCATTGCCCG CAAGTCTTCA GGATATGATT
ATTTCAAAAG CCAGGGAAAT AGACCCAGCA TTCGTGTTTA TTGCCGAAGA ACTTGAAATG
AAAAACGATG AAAAAGCAAA GAGAGAAGGT TACGATTGTA TATTAGGTAA CAGCTGGTAT
GCAGCTGCAA GACCAAGAGA ATTTTACAAA TTCATTGAAG AGACAGTACC TTATCTTAAA
GTACCTTTTA TTGCTTCTTG CGAAACACCA GATACTCCAA GGATAGTTGT AAGAGAAAAT
GGTGATAAGC TCAAATACCT TGCACCTGCA TTATTGTATT TTGCTCCGAA CGCGATACCA
TATATAAACA GTGGACAGGA AATAGAGGAA GTTCAACCAA TGAACCTTGG TTTGGATAAC
AACATATTCG GGAAAACTGT ATTGCCACCA AATGACCAAT TTTATGGAAA GCTTGCTTTT
TTTGATTATT ACGCATTACA CTGGGACAAA GCAAACGATG AAATTTATAA TTACTTGAGG
AGATTGTTAT CTATAAGGGA AAAGGTTTCT GAATTCTATG ATGGTGAATT CCGATATGTA
TATTTAAACT ACCAAGATGG TTTAACAGCA AATTACAGCT TCTGGAAAGA TAATCAGGGA
TTAATTGTAC TTGGGAATCT AAATCTTGCT CAGGGAAGGT ATATTGAAGT TTTTGTTAAT
GAAACCGCTG GAAGAGAGAT TGAAGTAAAA AGTGTAAAAG TTATAACTAA ATTTGGAGCA
AAGAATTTAC CAATATCAAA TAGTAATATT ATTCCATATG AACTTCAATC GGGTGATTTT
GTTATAATGT TAATAAATAG AGAATTATAA
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| Protein sequence | MNELRDLRDY LKTKITGKTL YALPKQWFIS HYAGKVSIKD GRYFVDPYEY FAFLIDYILE
NDKGFDYSKS LAMLNGEVKP IWIGKGKIYG ALPRATAAYN HKGFGAFEPE DIFGYKESGT
FLKMIALLPY LKNMGINILY MLPISKMSNI FKKGEVGSPY AVKNPVELDE SYHDPLLEGI
SIDEQFKALV QAAHMLGIRV VLDFIPRTAA RDSDLIKEHP DWFYWIRIEE VASYKPPHIP
ELPFKIPDPA DLSVIYSNEE VKQHLAKFTL PPNKLDPKKW QRVKKMEGDI LSNIAREFGI
ITPPGFSDWV NDPQPTWDDV TFLRLYLDHP AESQKYLPEN QPPYVLFDVV KSSKFPGNEP
NMELWEYLSD IIPSYQKRFG IDGARIDMGH ALPASLQDMI ISKAREIDPA FVFIAEELEM
KNDEKAKREG YDCILGNSWY AAARPREFYK FIEETVPYLK VPFIASCETP DTPRIVVREN
GDKLKYLAPA LLYFAPNAIP YINSGQEIEE VQPMNLGLDN NIFGKTVLPP NDQFYGKLAF
FDYYALHWDK ANDEIYNYLR RLLSIREKVS EFYDGEFRYV YLNYQDGLTA NYSFWKDNQG
LIVLGNLNLA QGRYIEVFVN ETAGREIEVK SVKVITKFGA KNLPISNSNI IPYELQSGDF
VIMLINREL
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