| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1113 |
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| Symbol | rpsM |
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| ID | 5452252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1211327 |
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| End bp | 1211698 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640874881 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001410617 |
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| Protein GI | 154249792 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000830783 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTA TCGTTGGTGT TGAAATACCA AGTAATAAAA AAGTACATAT TGCATTGAGA
TATCTCTACG GTATAGGACC AACACGCGCA ATGGAAATAT GTAAGAATAC AGGTGTAGAC
CCTGACAAGA GAGTTAAAGA ACTTACTGAG GATGAAATAA GCAAAATAGC TTCTTTCATT
CAACAGAATT ACAAAGTAGA AGGTGAACTC AGAACAGAAG TGATGAGAAA TATAAAGAGA
TTAATGGATA TAGGATGTTA CCGCGGCTTA AGGCACAAGT TAGGGCTTCC AGTTAGAGGT
CAAAGAACAA GATCAAATGC CCGTACAAGA AAAGGTCCAA GACCAAGCAG AATTAAGAAA
AAGGGTAAAT AA
|
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| Protein sequence | MARIVGVEIP SNKKVHIALR YLYGIGPTRA MEICKNTGVD PDKRVKELTE DEISKIASFI
QQNYKVEGEL RTEVMRNIKR LMDIGCYRGL RHKLGLPVRG QRTRSNARTR KGPRPSRIKK
KGK
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