| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1108 |
|---|
| Symbol | |
|---|
| ID | 5452489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1207360 |
|---|
| End bp | 1208661 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640874876 |
|---|
| Product | trigger factor domain-containing protein |
|---|
| Protein accession | YP_001410612 |
|---|
| Protein GI | 154249787 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00276647 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTA ATGAATTAGA AAAAGATAAA AATGTCATTG TAAAAGAATA TATTTTTGAT
GCCAACGATG TTAAAAGATT AGAAGATAAA GCCGTAAATT CACTTAACAG CAAAGGATAT
CAAATAGAAG GATTCAGAGT AGGAAGAGTT CCAAAGGAGA TATACAAACT TAGACTTAAA
GATGCATTCT ATAATATTTA TGTAGCAGAT GAAGCGATAA TAGAAGTCGA AGATGAACTC
GACAAAGAAA ATATAAGTGT TGTTATTCCT CCAGTTATCG TTGATGCAAG ATTTGATGCT
AATGGTGGAA AAGTTGTTGT TGAGCTTCAC CTCGAACCAG AAGTAACGTT CGACCCGTCT
AAAATTAAAG TTAGAAAAGC AAAAGAGGAT GAAGTGCTTG AAAGTTATGT CGAAATGAGA
GTAAAATATA TGTTAGATGA ACATGCTGTT CTTGAACCAA AAGAGGGAGA AGCACAAGAG
GGTGATGTTG TCAAGGTTAA GGAAACTGTT TTACTGAACG AAAAAGCAAT TAGAGACCAT
GAAGAAAGAG AATACTTACT TTTAAAAGAC GATGAAAGAG ATGCTGTCAA ACAGCTTTAT
GGTAAGAAAA AAGGTGATAC TGTTGAATTT GAGAAGACAT TTGAAAAAAG CGAAAATGAG
AAAATTACCT ATAAATATAT ACTAGAAGTC GAAGAAATAT ATAATAGAAT ACTCCCCGTT
TTGAACGATG AATTTGTCAA AAGCCTTGCT ATAGAAAATG TTGAAACATT GGAAGGTTTA
AAGGAAAAGT TCAGAAACGA GGGTAAGGAA ATATACGATA GAGAATTAGG CGATTCTTAT
AGAATGCAGA TAATTGACCA AATACCATCA GCAACAGAAA TTGATATTAG TGAAAAAACA
ATTCAAAGAG CTGTTGAAAA TATAATAGAT AATTTAAAAG AAGAAGGAAA ATACGACGAT
TATATCAAAA GCTACGGTAG TGAAGAAAAA CTCGTTGAGG AGTTTAAAAA CTATTACATC
AACCTTATCA AGAAAGACCT TGTAGTTAAA AAATTAGCCG AGGAAAACGA TGTAAAAGTT
AACGATGAGG ATATAAAAGC ATATGCGGAA ATAGTTTCAG TTGAATGGGG AGTAAGCCCA
GATAGAGCAG AAGCTTTGAT TAAATCAAGA ATAGATCTCA GAAACGAAGT TATAATGGAT
ATAGTCGAAT CAAAAGTCGC AAACTTACTT ATAGACAAAG TCCAGGTTGA AGAAGTTTCT
TTCAACAAAG ATGAGAAAAA TGAAGAAGAA AAGTCAGAAT AA
|
|---|
| Protein sequence | MQINELEKDK NVIVKEYIFD ANDVKRLEDK AVNSLNSKGY QIEGFRVGRV PKEIYKLRLK
DAFYNIYVAD EAIIEVEDEL DKENISVVIP PVIVDARFDA NGGKVVVELH LEPEVTFDPS
KIKVRKAKED EVLESYVEMR VKYMLDEHAV LEPKEGEAQE GDVVKVKETV LLNEKAIRDH
EEREYLLLKD DERDAVKQLY GKKKGDTVEF EKTFEKSENE KITYKYILEV EEIYNRILPV
LNDEFVKSLA IENVETLEGL KEKFRNEGKE IYDRELGDSY RMQIIDQIPS ATEIDISEKT
IQRAVENIID NLKEEGKYDD YIKSYGSEEK LVEEFKNYYI NLIKKDLVVK KLAEENDVKV
NDEDIKAYAE IVSVEWGVSP DRAEALIKSR IDLRNEVIMD IVESKVANLL IDKVQVEEVS
FNKDEKNEEE KSE
|
|---|
| |