| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1102 |
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| Symbol | |
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| ID | 5453232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1202786 |
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| End bp | 1203730 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640874871 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001410607 |
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| Protein GI | 154249782 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATATAC AAGTTACATC AAGGGAAAAC GGATGGAGAT TGGACAAATT CGTTATGGAG
AAAACACCAG AATGGATATC GAGGACCTTC ATACAAAGAG CGATAAAGAA CGGGGAAGTA
TTGGTCAATG GGACTTCAAA GAAGCCGAGT TACAAGGTGA AGTCTGGGGA TATAATTACC
TTGAATGCTC CAGAGGCCCC CGAGATACCG GAAATCCTAC CTGAAGATAT ACCACTTGAT
ATAATATATG AGGATAGAGA TATTCTTGTC ATAAATAAAC AGCCAGGTAT AATAACGCAT
CCAATTCCAT CTCACACATC TGGAACAATT GTAAATGGTG TACTGTACCA CTGTAAAGAC
TTACAGGGGA TAGGCGGAGT TCTAAGACCA GGGATAGTCC ACAGGCTCGA TAAAGATACA
AGTGGTGTTA TGGTTATCGC TAAGAACGAC CTTGCGCATC AGTCACTCAC AAAACAATTC
AAAGATAGGT TAACAGAAAA ATTGTACATT TGCCTTGTAA AAGGTGTACC AAAGAGAAAA
GAAGGCGATA TAGAAATAAA TATAGCGAGA AATCCTGTTC TTAGAGTAAA AATGACAGTA
ACAAATTCAG AATACGGCAA ACCCGCATTG ACTCATTACA AAGTTGTAAG AGAATTTGGT
GATATCGCCG CATTAGTCTT TGCATATCCA AAAACAGGTA GGACTCATCA AATAAGAGTC
CATATGAAAT ACATAGGTCA TCCGCTTATG GGAGATGAAG TTTACGGAAG GGCAAAAGAA
GATGAAATAT TCGGTATCAA AAGACAGATG CTTCACGCAC TGAGCTTATC GTTTTATCAT
CCGAGAACAG GCGAAAAAGT TAAATTCATA GCTAAAATTC CTCAAGATTT CAAAGAGGCC
ATACAAAAGC TCGATGATTT CATTAGAAAA AATAAAAATC TTTAA
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| Protein sequence | MDIQVTSREN GWRLDKFVME KTPEWISRTF IQRAIKNGEV LVNGTSKKPS YKVKSGDIIT
LNAPEAPEIP EILPEDIPLD IIYEDRDILV INKQPGIITH PIPSHTSGTI VNGVLYHCKD
LQGIGGVLRP GIVHRLDKDT SGVMVIAKND LAHQSLTKQF KDRLTEKLYI CLVKGVPKRK
EGDIEINIAR NPVLRVKMTV TNSEYGKPAL THYKVVREFG DIAALVFAYP KTGRTHQIRV
HMKYIGHPLM GDEVYGRAKE DEIFGIKRQM LHALSLSFYH PRTGEKVKFI AKIPQDFKEA
IQKLDDFIRK NKNL
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