| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0964 |
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| Symbol | |
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| ID | 5451862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1055481 |
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| End bp | 1057817 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874726 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001410471 |
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| Protein GI | 154249646 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1956] GAF domain-containing protein
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCT TGGTTGAAAA CCACATAGGT GATTTTCTTG ATATTTTAAC ATATCAAAAA
AAAGAATGGA TCGAATTTTG GAAAAAGCTT CCTTATAAGC CAATTACCGA CAACTATGCT
AACAAATTCG ACGGTTTCTA TGAGAAACTT TTATCTATAA GCAGAAATGA ACTTACCGAG
CTTTCGCATT GGTATGACGA AAATAAAGAA AATATAAGAG ATGAGCTCAC AGTTCGCATC
AGAAAGAGCG CGCGCGATTT TCAGCTTTCT AAGGAAGATT TTGTGATTTA CCTTATCGTT
GGTATTGGTG AGAAGGATTG GATTGTTGTT GACGGGAAGA GTGAAAAAGT TATCGTTTTT
GATGTGTACT CCATATGGAA GAAAGGTAAA ATAGACAAGC TTGCAGATGC CATATATCAA
TCGGTTGTCC ACTTTAGGCA TGGAGAACTT GAAGGAAATT ATTACGATAA ATCAGAGATT
TTCGAATATT TGAAAAAACA AATAGTATCT GCCAAAAACG AAAATTTACT TGAGATGATT
TGTAAATTGC TTGATGAACA TGTCCCATAC TACAACTGGA CAGGTTTTTA CCTTATGGAC
GATGAAGGAA TGCTAGTCCT TGGTCCATAC GTGGGTGAAC CTACAGAACA CGTTAGAATT
CCTGTTGGAA AGGGTATATG TGGTCAGGCG GCAGATACAA AACTTACCTT CATTGTGCAA
GATGTTTCGC AAGAGACAAA TTATCTTTCT TGCAGCCCTC ATGTGAAGAG TGAAATTGTT
GTACCTATAT TTAGAAATGA TGGAAGCGTA TTTGGTGAAA TAGACATAGA TAGTCATTAC
ATTGCTCCAT TCGATAATAG AGATAAAGAA TTTCTTGAAT GGATCGCAAA GCAATTGATG
GTTAGGACTG TACATTGGGA TGAATTTAAA AGGCGTATAA AGATTGCTTA CATAGACAGT
TATTTATCAT ATCTGTTAAG TGAAATAATA AAGTACAATG TGACTTACTT TGTTGACTTG
TACGTTTTCA ACGACCCAAA TAAAGTTCCA GAAAATCTAT TTAAACTTTG GAGAATTTCT
GAAAAACTTT CATGTTCTGA AATTAAAAAC ATCTATGTTG TTGACAAAGT AGAAGAACAA
AGAGCGGTTT TGTATTCAGA AATTGATAGT ATATCTCTTG ATTACAATAT ACTTAACCTA
CCACCTCAAG ATGTTGTGTT TTACATGATA AAAAATCTAA GGGAAGAAAT GGCCAAAAAA
TTGTTCTATA TTCATTACCA AGCAACAAGA CTTGCGCAAA GCTTTATAAA CTCCAAATTA
ATTATTAAGT ATACTCTTAA TAAAGATTCA AATATAAACA CTATACTTTA CGCATTTCTC
ACAGGTATAA CTGCCGGTTA CGCAGGTTCT TTCAATAGAG CAATGTTCTT TTATTATACC
GATGAGAAGT TTGTTTTCCA AAAAGCCATT GGTCCAAGAA CACAGGAAGA GGCTAATAGG
ATATGGGAAG CGATAGAAGA TATCGAACTT AATATGAAAG ACTTTTTAGA TACTGTGTCT
AAAGATTTCA GATCGGCTCT TGAATTACTT TACGAGGGAA AAACTATAGA ACTTGATGTT
GTTAAAAAAT ACACCGATGG AGAGGCTCAC GTAATTTCCA AGGAAGAGAT TCCAGAACTT
GCTGAAACAT TTGATATATT AAAAGAGTTC GCGCTTGTCA CTGTCAAAAG CGGTGAAAAT
ATACTTGGAT TGATTATAGC TGATAACAAT TTCGATTTAA AACCTATCAG TGACTATCAA
CTCACCGTTC TAAAAGACCT TGCTGACCAG ATGGCTTTTA TACTTGAAAA CAGAAGGTTT
TTTGAGACAG TGAAAGAAAA AGCGGAGATT GATGTATTGA CTGGGTTGAA GACACGAAGA
ACATTCGAGG AATTTATTCA GAACATTCCA CTTAACAGTT TTTCACTAGC GTTTTTAGAC
TTGAACAAAT TTAAGATGAT TAACGATATG TATGGACATG AGAAAGGCGA TGAAATTTTG
AAGAAATTTG GTAAGTGTAT AAATATGAAC ATACGAAAAA CAGATATCGC GTTCCGTTAT
GGTGGTGATG AAGTCATAAT TATACTCAAT ACAACTGAAG AAACTATCGT CGAAAAGGTA
ATTGGAAGGA TATTAGATTG CTTTAGTTCT TCAGCGGGTA TGACATTTTC AACAGGTGTT
GCAATCTATC CTGCGGAAGG GGATATCAAC AAGGTATTGA AACTTGCAGA TGAAAGATGT
TATAAATCCA AAATAACTGG AAAGATAGAA TTCGAAGATA GTGAACTAAA TTCCTAA
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| Protein sequence | MRSLVENHIG DFLDILTYQK KEWIEFWKKL PYKPITDNYA NKFDGFYEKL LSISRNELTE
LSHWYDENKE NIRDELTVRI RKSARDFQLS KEDFVIYLIV GIGEKDWIVV DGKSEKVIVF
DVYSIWKKGK IDKLADAIYQ SVVHFRHGEL EGNYYDKSEI FEYLKKQIVS AKNENLLEMI
CKLLDEHVPY YNWTGFYLMD DEGMLVLGPY VGEPTEHVRI PVGKGICGQA ADTKLTFIVQ
DVSQETNYLS CSPHVKSEIV VPIFRNDGSV FGEIDIDSHY IAPFDNRDKE FLEWIAKQLM
VRTVHWDEFK RRIKIAYIDS YLSYLLSEII KYNVTYFVDL YVFNDPNKVP ENLFKLWRIS
EKLSCSEIKN IYVVDKVEEQ RAVLYSEIDS ISLDYNILNL PPQDVVFYMI KNLREEMAKK
LFYIHYQATR LAQSFINSKL IIKYTLNKDS NINTILYAFL TGITAGYAGS FNRAMFFYYT
DEKFVFQKAI GPRTQEEANR IWEAIEDIEL NMKDFLDTVS KDFRSALELL YEGKTIELDV
VKKYTDGEAH VISKEEIPEL AETFDILKEF ALVTVKSGEN ILGLIIADNN FDLKPISDYQ
LTVLKDLADQ MAFILENRRF FETVKEKAEI DVLTGLKTRR TFEEFIQNIP LNSFSLAFLD
LNKFKMINDM YGHEKGDEIL KKFGKCINMN IRKTDIAFRY GGDEVIIILN TTEETIVEKV
IGRILDCFSS SAGMTFSTGV AIYPAEGDIN KVLKLADERC YKSKITGKIE FEDSELNS
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