| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0940 |
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| Symbol | |
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| ID | 5452090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1016895 |
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| End bp | 1019297 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640874700 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001410447 |
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| Protein GI | 154249622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACCTT TCTTTTATTT TCTAACTTCA AAGCTAATTG GAGGGTTAAG AGTGTTTTAT
TCACACCCGG ATAAAAGATT AATCGAACAT TTAAAAGAAG TTTACGAAAT ATCTCAAGAA
AAAATAAATG ACGGTGATTT AAAAAAGTGC TTTAAGATAA TAGCATACAC TCATGATTTT
GGAAAATTTA CCACATATTT TCAAAAATAT TTAGAAACAA AGAAAGAAGG AAAATATGCA
AAACACGGTT TCATTTCGGC TCTATTTGCG GCTTTTTGTA GTCTAAAAGA ATTTGGTACG
GAAAGTTTTC TTCCATTGAT TTCTTATAGC GTAGTACTGC ATCATCATGG TGACTTGGAA
AACGTAGATA ATCACTTACC TATAAGCACA AGAGGTATAA TGAACTCTGA CTATAAATTA
GCTGATAAGA TAGAAATATT TGAAGTCCAA AGGAATGACA TAATAAAGAA TAAAGATTCA
ATTATAGAAG AGTACAAAAC CATAGACGAA CAAGAAGAAT ATAAAATTAA TTTTGTAGAA
TACATTCAGA AATTCTTAGA ATGTGATATT GTAGAAGTTC TAAAAATGCT AAAACAAATA
AAGATAAAAT TAGAGAAAGA AAAAAGTGAT GATGTGTTTT TCATTCATCA ATTGCTTTAT
TCTGCTTTAA TATCCGCAGA CAAACTCAGC GCATCTGGAA CAATAATTCC GAATGAAGCT
TTTGCCAGTT TTGCGGAACT AAACAGAGGA AGAGAAGTAA TGATAAAAAC TGCTATTAAC
AATTTAGGAA TAAATGAAAT AAGGAATGAA ATATTTGAAA GAATTCAAAA AAATTTAGAA
AAGTACTATA ATAAATCGAG AATATTTACA ATAACTGCGC CTACTGGGAC GGGAAAAACT
TTCGCTGGTT TCTTCGCGGC AGTAAAATTA AGAGAGCTTT TAGGTGGCAA TCGAAGAATT
GTTTACTCAC TCCCATTTAC CTCAATAATA GACCAAAATT ACGAAACAAT TTATCAGATA
CATAAAGTTT TGAAAAACTT CGAAAGGGAA AGTAGCAAGT ACATAATAAA GCACCATAGT
TTAGTGAAAC CTGAATACAT AGAAAACGAA TATAAGTATG ATTTATTAGA ATCTGAACTA
CTAATTGAAA ATTGGTCAAG TGGAATAATT GTAACAACTT TTGTTCAACT CTTTGAAACA
TTAATAAGTA CGAGAAATAG AATGCTGAAA AAACTAATCA ACATAAAAGG CTCTATAATT
ATCTTAGACG AAATACAAGC CATAGACATT TCTCTGTTAC CTCTTATTGA ATATGTTTTA
GAAAAAGCGA CAGAACTATA TGATTTAAGA ATAATACTTA TGACAGCAAC AAAACCGTAC
ATATTTAAAG ATTCTTTAGA ACTCTTGGAT AACAATGAAA AATACTTTTC AATTTTTAAT
CGAACAACTC TTTTACCAAA TTTATCTAGC AGAAAATTAG AGGATTTTAT AAAAGAACTC
AAAGAAAATT TGCAAGATAA GTCATATTTA ATAGTCTGCA ATACAATAAA TTCCTCGTTA
GAAGTGTACG AAAATTTAAA AGGAATAAAC AGACCCGTTT TTTACTTATC AACAAATTTA
CTCCCAATTC ATAGATTAGA AAAAATAAAA AAAATAAAAG AACTCTTAAG TAAAGGCGAA
AAGATAATAC TTGTTTCTAC TCAAGTTGTG GAGGCAGGAG TAGATATTGA TTTTGATGTG
GTAATAAGAG ATATAGGACC TTTGGATTCT ATTATCCAAT GCGCCGGAAG ATGTAATAGA
AATAATTTAA AAGAAAACGG GACAGTATAT GTTTACTCTC TTATTCCAAA TGAGAGCAAT
AATGATTTAA CTTACGGATA TGGAAGATAC ATCTATGGTT TGACAACTCT CCAAGAGACG
AAAAAGATAT TGCAAAAATC AGAAAAATAC AGTGAAAAAG ATTATTTCTG CTTAATTTCA
GAGTATTTTA AATCTATTCA GGAAAATTTA TCTAAGAAAA GGTCAGAAAA CTTGATTAAA
TCAATAAAAA CTTTAAATTT CTCTGAAGAT AAAAGTGAAA ATATAACACC AATATCAGAT
TTTTCGATTA TAGAAAACAA GCCAAATTTT GTGGATGTTT TTGTAATGTG CGATGATATT
TCAGAAGAAG GTTTTAAAAG ATTTTGTGAC ATAATAAAAT TAAAAGATTA TTATGAAAAA
CGAGAAAAGT ACTTAGAAAT AAAGCCAATA ATAAGCAATT ACACAATTTC AGTACCGATA
GAATACCATT CATCTTTTGT TGAACAATTT GGACTTTATG TTATTCCACG TGAAATAGTA
AATGATTACT ACAATTATGA AACTGGGTTT AAAAGGCACA AGAAATCTTA TGATATAATA
TGA
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| Protein sequence | MAPFFYFLTS KLIGGLRVFY SHPDKRLIEH LKEVYEISQE KINDGDLKKC FKIIAYTHDF
GKFTTYFQKY LETKKEGKYA KHGFISALFA AFCSLKEFGT ESFLPLISYS VVLHHHGDLE
NVDNHLPIST RGIMNSDYKL ADKIEIFEVQ RNDIIKNKDS IIEEYKTIDE QEEYKINFVE
YIQKFLECDI VEVLKMLKQI KIKLEKEKSD DVFFIHQLLY SALISADKLS ASGTIIPNEA
FASFAELNRG REVMIKTAIN NLGINEIRNE IFERIQKNLE KYYNKSRIFT ITAPTGTGKT
FAGFFAAVKL RELLGGNRRI VYSLPFTSII DQNYETIYQI HKVLKNFERE SSKYIIKHHS
LVKPEYIENE YKYDLLESEL LIENWSSGII VTTFVQLFET LISTRNRMLK KLINIKGSII
ILDEIQAIDI SLLPLIEYVL EKATELYDLR IILMTATKPY IFKDSLELLD NNEKYFSIFN
RTTLLPNLSS RKLEDFIKEL KENLQDKSYL IVCNTINSSL EVYENLKGIN RPVFYLSTNL
LPIHRLEKIK KIKELLSKGE KIILVSTQVV EAGVDIDFDV VIRDIGPLDS IIQCAGRCNR
NNLKENGTVY VYSLIPNESN NDLTYGYGRY IYGLTTLQET KKILQKSEKY SEKDYFCLIS
EYFKSIQENL SKKRSENLIK SIKTLNFSED KSENITPISD FSIIENKPNF VDVFVMCDDI
SEEGFKRFCD IIKLKDYYEK REKYLEIKPI ISNYTISVPI EYHSSFVEQF GLYVIPREIV
NDYYNYETGF KRHKKSYDII
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