Gene Fnod_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0925 
Symbol 
ID5452963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1000197 
End bp1001765 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content32% 
IMG OID640874685 
Producthypothetical protein 
Protein accessionYP_001410432 
Protein GI154249607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACG CAACTTTCAA AAGTTCTATG AAAGCTAAAT CAAATTTGGT TATATTATTC 
TTTGCTTTAT TTTACTTAAT CTTGCTACCA ACCAAATCAC TTGCGGTTAT AGATGAAGAA
ACCGCAAGAA ATTATTTTTC ACAGTCGCTA ATTCAAATGT ATCAAGGTAA TTTCCAGAAA
GCATATGAGC TTTCTAAACA AGCTCTCTCT GGAAGGGTAT ATGTCAATGA GATAGCAAAT
TTCTGGTTTT TGAGAGGCAG GCTTGCAATT GCAAATGGAC TTATAGACAA AGCAATAGAA
GAATTTGGTA CTTTTACACA ACTTGTAAAA AATGATGATA TAGATAACAT ATTAGAAAAG
GTAAGGTACT TTAGAAACAT TAATTTATCG CCTTCAAAGA ACTTTGAACT TAAATATATC
GGTAATGCGA GTGGAATAAT AAAAGGCATC GAATATTTTC AAACACCTGT TAGTGTTGCT
GTCTATGGAG ATTCTTATTG CGTACTCGAT AGTAAAAACA GAAGAATAGT ATATTTCAAA
AATAATCGAA TGACAAACAT AAAAAAAGTT TCGCACGATA TCAAGCAAAT AATATTCGAT
CGCAATGGCT TACTTTACTT GGTTAGCGAA AACGCGATTT ATAACGATTC AGAATACGAA
TTATTGAAAG GCTTACGTTC ACCGATAGTC GCCGGATTTG ACAGGAACGG TAATATGTAT
ATAGTTGACT TTGACAGAAT AGTTTTGTTT AATGTTTATT CCAACAATAT CACTGAACAT
AAGCTCCAAA AAGTAACTCC TGCATTAGAT GCTGAAATAA CAATAGACAA ACTTTACATA
TTGAACGGAT TAACTCAGGA AATAGATATA TACGACCTGA AAAACTTTTC AAAAATTCAG
TCGATAAAAT TATCAGAGAA GATTTGGAAT TTTGAGGTAA CACCTTACGG TGACATAATA
TACCCAAGTA AAGATGGTTT AACAGCTAAC GACAAAAAAT TCGATATAAA AGGAATAGAC
CTCATTGAAT ATAGCTATCC AAATCTTTTT GTTATGAAAT GGAAAAATAA GCAAATCGAA
CATTATGTTT TAAAAGATGA TAAGCCGCTA TTTGTAACTA TCGAAAAGTT AGAGTTTGAC
GATAATTTTG TTTATGCATA CATCAGTGTC GAAGATCTAT TCGGTGACGA AATACACTAT
ATTCAACATT CCTTAAGCAT CTTTGAGCAT GATATATACG CTCCAAGTGA CGTATACAGT
AGCCAAATTA ATCCAAAGTA CATAACTCTA AAAGAATGTA AAGGAGAACT GATAATTTAT
AGATTACAAT CTTTAAGAGT CTTAGGTAAC TGTCCAATAC TCAACAAATT TACAGGTGCG
CCAACATATC AAAAAGCAAT TGAAAATTCA AAAAAACTTA TTTGGATTGC GCAATGGAAA
TATATCAGAC CAATTCCGCC AGGATTAATA AAAGTATCAG CCCGTGTAAC TTTCAAGAAT
AATGTTTACT ATGATACCAC GTTTTACACA AGTACACTTA TAAAATCAGA AGAACTCAGA
AAAAAATAG
 
Protein sequence
MKYATFKSSM KAKSNLVILF FALFYLILLP TKSLAVIDEE TARNYFSQSL IQMYQGNFQK 
AYELSKQALS GRVYVNEIAN FWFLRGRLAI ANGLIDKAIE EFGTFTQLVK NDDIDNILEK
VRYFRNINLS PSKNFELKYI GNASGIIKGI EYFQTPVSVA VYGDSYCVLD SKNRRIVYFK
NNRMTNIKKV SHDIKQIIFD RNGLLYLVSE NAIYNDSEYE LLKGLRSPIV AGFDRNGNMY
IVDFDRIVLF NVYSNNITEH KLQKVTPALD AEITIDKLYI LNGLTQEIDI YDLKNFSKIQ
SIKLSEKIWN FEVTPYGDII YPSKDGLTAN DKKFDIKGID LIEYSYPNLF VMKWKNKQIE
HYVLKDDKPL FVTIEKLEFD DNFVYAYISV EDLFGDEIHY IQHSLSIFEH DIYAPSDVYS
SQINPKYITL KECKGELIIY RLQSLRVLGN CPILNKFTGA PTYQKAIENS KKLIWIAQWK
YIRPIPPGLI KVSARVTFKN NVYYDTTFYT STLIKSEELR KK