| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0880 |
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| Symbol | |
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| ID | 5452072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 954726 |
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| End bp | 955076 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640874640 |
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| Product | aspartate alpha-decarboxylase |
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| Protein accession | YP_001410389 |
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| Protein GI | 154249564 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0853] Aspartate 1-decarboxylase |
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| TIGRFAM ID | [TIGR00223] L-aspartate-alpha-decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.399475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGGAAA TAATGTTAAA AGCAAAGATT CACATGGCAA CGGTAACTGA AAAAGAGATA
GAATACGAAG GAAGTATAGG AATAGATGAA GAATTATTAG AACTGAGTGG CATAAAAATT
AACGAGATGG TTCTTATCTC AGATGTTAAC AACGGTAACA GATTTATTAC ATATGTCATT
CCAGAACCAC GTGGGAGTAG AAAGATTTCT TTGAATGGTG CTGCCGCGAG ACTCGTTGAA
AAAGGTGATA AAATAATAAT TATGGCATTT GGATTGTATT CCAAAGATGA GTACAAAAGC
CCCAAAATTT TGATTATGAA TTCCGATAAC ACGGTTAAAG AAATAAGATA A
|
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| Protein sequence | MMEIMLKAKI HMATVTEKEI EYEGSIGIDE ELLELSGIKI NEMVLISDVN NGNRFITYVI
PEPRGSRKIS LNGAAARLVE KGDKIIIMAF GLYSKDEYKS PKILIMNSDN TVKEIR
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