| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0847 |
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| Symbol | rplK |
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| ID | 5452403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 924785 |
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| End bp | 925210 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640874599 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001410357 |
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| Protein GI | 154249532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000114172 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAA AAGTTGTTGC ACAGGTAAGA CTTGTGCTTG AAGCCGGAAA AGCAACACCA
GCTCCTCCAG TAGGACCAGC TCTTGGTCAA AGAGGAGTTA ATTTGATGGA ATTCTGTAAG
AAGTTCAACG CTGTTACAGC CGACAAAGCA GGACTTCTTA TTCCTGTCAT TGTAACAGTT
TACGACGATA GGTCGTTCAC ATTTATTACA AAAACTCCTC CTGCAAGCTT CTTGCTCAAG
AGAGCAGCAA AGATTAACTC TGGCTCAAGT GAGCCAAAGA GAAAAGTTGC AGGAAAAGTC
ACAAGACAAC AGATTAAAGA AATCGCCGAA CTAAAAATGC AAGATCTCAA CGCCAATGAC
CTGGAAGCTG CGATGAAGAT TATCGAAGGA ACCGCACGCA GCATGGGTCT GGAAGTTGTA
GATTGA
|
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| Protein sequence | MAKKVVAQVR LVLEAGKATP APPVGPALGQ RGVNLMEFCK KFNAVTADKA GLLIPVIVTV
YDDRSFTFIT KTPPASFLLK RAAKINSGSS EPKRKVAGKV TRQQIKEIAE LKMQDLNAND
LEAAMKIIEG TARSMGLEVV D
|
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