| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0603 |
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| Symbol | |
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| ID | 5451879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 670458 |
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| End bp | 671117 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640874344 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_001410115 |
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| Protein GI | 154249290 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000106582 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACACG TAGTAAGTGC TCAACTTAGG TCTATTGTAG GTAACAAAAG AGCGGTAAGA
AGACTCAGAG CGACTGGAGC TATTCCTGCG GTAGCTTACG GTCCTGGTTT AGAAAAACCA
CTCAGCCTTG TTTTAAACAA AACAGACTTT TTGAAGATTT TTAAACACAT TACAGAATCA
ACACCTCTCA CTCTCGTCGT AAAAGATGAA AACGACAAAG AAGTTCTTAA ACACCTTGCA
TTCATTAAAA TGGTACAGTA CGACAAAGTA ACAGATGAAG TAAAACACGT TGATTTTTAC
GTACCAGAAG CTCACCACAA GATGAGAATC AATGTACCTA TAGAAATCGT TGGAAAGGCA
ATAGGTGTTG AAAAAGGCGG TATAATGGAA ATTATCCACC ACGAAGTACC AGTCAAAGCA
TTACCTGACA GAGTCCCTGA AGTGATTAAA ATCGATGTAA CAAATCTTGA GCTTGGTGAG
ACACTTAGAG TTAAAGACGT TGTTCTTCCA GAAGGTGTAG AAATAGATAT GGATGATGAA
GATGTTCTCA TCACAGTTGT AGTTCCAAGA GGCCTTGAAG TAGAAGAAAC TACAACAACA
GAAACGAGTA ACGAACCAGA AGTTATAAAG AAAGGTAAGA AAGAAGAGGA AGAAAAATAA
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| Protein sequence | MEHVVSAQLR SIVGNKRAVR RLRATGAIPA VAYGPGLEKP LSLVLNKTDF LKIFKHITES
TPLTLVVKDE NDKEVLKHLA FIKMVQYDKV TDEVKHVDFY VPEAHHKMRI NVPIEIVGKA
IGVEKGGIME IIHHEVPVKA LPDRVPEVIK IDVTNLELGE TLRVKDVVLP EGVEIDMDDE
DVLITVVVPR GLEVEETTTT ETSNEPEVIK KGKKEEEEK
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