Gene Fnod_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0559 
Symbol 
ID5452371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp617044 
End bp618015 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content35% 
IMG OID640874307 
Productmannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_001410078 
Protein GI154249253 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA TAATCCTAGC AGGTGGAAGT GGCGAGAGAT TCTGGCCACT ATCGACTAAA 
GAAACTCCAA AACAATTTTT GAAACTTTTC TCTGACAAAA CTCTTCTCAG AGAAACTTTC 
GAAAGACTTT CATTCAAATT AAAACCAGAA GACATTTTCA TAGTCACAAA TAAAATTTAT 
ACCGAACTCA CTCACCAAGA AATTCCTGAA ATTCCAAAAA AAAACATTCT CTCTGAGCCA 
CTCAAGAAAA ACACAGCACC AGCATGTACA TATGGGACAT TGAAAATGGA CCCAGAAGAA 
ATAATTTTAG TTGTTCCATC AGACCATTAC ATCCCAGAAA TTGAAAAATT CTGGCAAATT 
GTTGAAACTG CCGAGCAATT TTTGAAGAGA AATGATGGTA TAATAACCTT TGGAATAAAA 
CCAACTCGAA TTGAGACAGG CTATGGTTAC ATAGAATCAG GTGAACAAAT TGAACAAAAC 
ATATCCATAG CCAAAAAATT CCACGAAAAA CCAAATTACG AAACAGCGCA GTTTTACATA 
AACCAAGGCA ATTACTTTTG GAATAGTGGA ATGTTCATGT GGAAAGCAGA GTATTTCATC 
GAACAAATGA AAAAACACGC ATTAGAAGTT ATAGAACCAT TCTTAAAAGA GAAAGATATA 
GAAAAAATTT ACGAACAAGT ACCATCGATA AGCATAGATT ACGCACTCAT GGAAAAAGCA 
GACAGAATAT ACACAATCAA ATCCGAATTC ATATGGTCAG ATGTTGGGAA TTTTAAATCA 
CTGAAAGAAT TAGGAGTAAG CAATTCAAAG AATTCAGCGA CCATAGACTC ACAAAACGCA 
TTTGTACTTA CAACCAAACC AACGATAGTG ATAGGGATAG ATGATATAAT AGTTGTTGAG 
AGTGAGAATG GGATATTAGT TTGCAAAGCT GAAGAAGTTG AGAAGATTAG GGAAGCGCTT 
AAGAAGATTT GA
 
Protein sequence
MKAIILAGGS GERFWPLSTK ETPKQFLKLF SDKTLLRETF ERLSFKLKPE DIFIVTNKIY 
TELTHQEIPE IPKKNILSEP LKKNTAPACT YGTLKMDPEE IILVVPSDHY IPEIEKFWQI 
VETAEQFLKR NDGIITFGIK PTRIETGYGY IESGEQIEQN ISIAKKFHEK PNYETAQFYI 
NQGNYFWNSG MFMWKAEYFI EQMKKHALEV IEPFLKEKDI EKIYEQVPSI SIDYALMEKA 
DRIYTIKSEF IWSDVGNFKS LKELGVSNSK NSATIDSQNA FVLTTKPTIV IGIDDIIVVE 
SENGILVCKA EEVEKIREAL KKI