| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0489 |
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| Symbol | |
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| ID | 5453153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 526255 |
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| End bp | 528240 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874238 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001410010 |
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| Protein GI | 154249185 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATATG AACTTATAAG TGATTATGAA CCGATGGGGG ATCAGCCTCA GGCGATAGAA
AGTCTTGTAA ATGGTTTGAA TAAAGGTTAT CGCTTTCAAA CGCTCCTGGG TGTTACGGGG
AGCGGTAAGA CATTTACGAT GGCAAATGTT ATAAAGGAAG TTAATAGACC TGTTTTAATA
ATCTCCCCAA ATAAAACTTT AGCAGCGCAA CTTTATTCGG AGTTTAAAGC GTTCTTTCCG
AATAATAAGG TGGAGTTTTT CATAAGTTAT TACGATTATT ATCAGCCTGA GGCGTATGTA
CCCACAAAGG ATTTGTATAT AGAGAAAAGT GCGGATATAA ACGATGTTAT AGCGCGTATG
CGTATGAGTG CTATAAAATC TATAATGACG CGCAGGGATG TTATCGTTGT TGCAAGTGTC
TCTGCGATAT ACGCATGTGG TGACCCACGT GATTTTGATA CGCTCAATAT AAAGCTCGAG
GTTGGGCAGA GGATAAATCT GTCTGAATTT GTCAAGAAGT TAGTTAAGAT AGGTTACGAA
AGAAAGGAAG ATATAGGTTT AACTGGAAGT TTCAGGCTCC GTGGTGATAC GCTGGAAATA
TTCCCGTCTT ATCAAGATGA AGGGATAAGG ATAGAGTTAT TCGGTGATGA AATTGATAGG
ATGTACACAT TTGATAGGAT GAATAGAGAT GTTATAGAAC GACTTGATAG ATTAACCATA
TATCCAACAA AGGAGTACGT TACAACTGAG GAAAAAATAG AGAGAGCAGT TAAGAGTATT
CGCGCAGAAT TGGATGAACA GGTTAAGAAG TTAAGAAGTG AAGGTAAGGA GTTGGAAGCA
CAAAGGCTTT GGCAGAGAAC GATGAATGAT ATAGAATTGC TTTCTACACT CGGTTATTGT
ACCGGCATAG AGAATTATTC AAGACACTTT GATGGCAGAC AACCTGGAGA GCCTCCTTAT
TCACTCCTTG ATTATTACGA CGAAGATTTC ATAGTGTTTA TAGATGAGTC GCATATCACT
ATTCCACAAC TCAGAGCGAT GTACCATGGT GAGATGTCAA GGAAGAAAAG CCTTGTAGAA
TATGGCTTTA GGCTGCCTTG CGCTTACGAT AACAGGCCGT TGAAGTTCGA TGAGTTTATG
CAGAAAGTTA ATCAGGTTAT ATTCGTTTCT GCAACGCCCG GACCTTACGA ACTTGAGGTT
TCAGAGCAAG TTGTTGAACA GATAATCAGA CCAACTGGTT TAATAGATCC ACAAGTTGAG
GTAAGACCAA CGAGGTATCA AGTTGATGAT TTAGTAAACG AGATTGTACA AGTCAAAAAA
CGTGGTGAGA AAGCGTTAGT CACTGTACTT ACGAAGAAAA CAGCTGAGAT GTTGGCTGAA
TACCTTGTAG AATTCAACAT CAGGGCGTTG TATTTGCATT CGGAATTAGA TGCGATTAAA
CGTGTGGAGG TTTTGAAAAA ACTAAGGGCT GGAGAAATAG ATGTTGTTGT GGGTGTCAAC
TTGCTCAGGG AAGGTCTTGA TTTGCCTGAA GTGTCTTTGG TGGCAATATT GGATGCGGAT
ACTGAAGGTT TTTTGAGAAG TGAGACTACG TTGATACAGA TAATCGGAAG AACCGCAAGA
AATGAAAATG GAAAGGTTAT TATGTACGCC GATAGGATAA CACCAGCTAT GCAACGTGCT
ATTGATGAGA CGAACAGAAG AAGGAAAATA CAAATGGAGT ACAACGAAAA GCATGGAATA
AAGCCAAAAA CGATTATAAA ACCACTGATG GAAGACATAT TTGCACCGTT TAGAGACAAA
GAAGAGGAAA TGTACAAAGT GTACGAGGAC TCTATTTTAC AAATGAAAGA GAGTTTATCT
TTGGAAGAAT ACGCTGCTTT GCTTGAAGAG GAGATGTACA AAGCTGCCTC TGAATTGCGT
TATGAAGATG CCGCAAGGTT GCGTGATGAG CTTTTCAAAA TAAAAGAGGA ACTTAATAGG
AATTAG
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| Protein sequence | MPYELISDYE PMGDQPQAIE SLVNGLNKGY RFQTLLGVTG SGKTFTMANV IKEVNRPVLI
ISPNKTLAAQ LYSEFKAFFP NNKVEFFISY YDYYQPEAYV PTKDLYIEKS ADINDVIARM
RMSAIKSIMT RRDVIVVASV SAIYACGDPR DFDTLNIKLE VGQRINLSEF VKKLVKIGYE
RKEDIGLTGS FRLRGDTLEI FPSYQDEGIR IELFGDEIDR MYTFDRMNRD VIERLDRLTI
YPTKEYVTTE EKIERAVKSI RAELDEQVKK LRSEGKELEA QRLWQRTMND IELLSTLGYC
TGIENYSRHF DGRQPGEPPY SLLDYYDEDF IVFIDESHIT IPQLRAMYHG EMSRKKSLVE
YGFRLPCAYD NRPLKFDEFM QKVNQVIFVS ATPGPYELEV SEQVVEQIIR PTGLIDPQVE
VRPTRYQVDD LVNEIVQVKK RGEKALVTVL TKKTAEMLAE YLVEFNIRAL YLHSELDAIK
RVEVLKKLRA GEIDVVVGVN LLREGLDLPE VSLVAILDAD TEGFLRSETT LIQIIGRTAR
NENGKVIMYA DRITPAMQRA IDETNRRRKI QMEYNEKHGI KPKTIIKPLM EDIFAPFRDK
EEEMYKVYED SILQMKESLS LEEYAALLEE EMYKAASELR YEDAARLRDE LFKIKEELNR
N
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