| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0462 |
|---|
| Symbol | |
|---|
| ID | 5453188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 498853 |
|---|
| End bp | 499593 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640874212 |
|---|
| Product | oxidoreductase FAD-binding subunit |
|---|
| Protein accession | YP_001409984 |
|---|
| Protein GI | 154249159 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.338202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAATT TATCGAATAA ATCAAGTGAA AAGATTAAAA GTTATAAACT ATCGAAGAAG
GAAGTTTTTC AAATCACAGC TGATACCTAT TTGATAGTTT TTGAAGGTGG AAGTTTCGAT
TTTGATTGTG GTCAATTTTG TATGATTGAT GTTGATTCAT ACGGACTTAC AAGAAAACCA
TTTACTTTGG GAAAATTTGA AGGTAACTTG GCAATTTCTG TAAAAATAGT TGGTGATGGA
ACAAGGTATA TTGTTGAAAC AAATGAATTG ATAGATATCC TTGCGCCGTT AGGTAATCCA
TTTATGCCAG GAGAACCAGA AAGAGCAAGA GAAAGCAATG GAGTGGTTGT TGTCGCTCCT
TCGTGTTTTG CTGAAGGATA TTTTATTTCT CAAAAATTTA ATGTGCCACT TTACGTGACT
TCAAAAACGC CTTTTTCTGA AAAATTCGTT GAAAAGTTTA GAGATAAAAA TATGGAATTT
ATAGTTGGAG ATAGTGAATT TTTGGGTTTG ACAGAAAGAC TAAACGATTC TGATTTTGAT
TGGATTTTTG TTTCAGGTTC AAAAAATATG GAAAAGATAG CGGTTAAAAA TTTGTATAAG
AAAATAGTTT ACATTTCTCT TAATGAATAT ATGGGATGCG GAATTGGTGC TTGCAAGAGT
TGTGCGGTGG AAAGTAAATA TGGAATAAAA CATGTTTGCA CAGATGGACC TGTGTTTCGG
GGTGATGAAG TATGTCTATA A
|
|---|
| Protein sequence | MGNLSNKSSE KIKSYKLSKK EVFQITADTY LIVFEGGSFD FDCGQFCMID VDSYGLTRKP
FTLGKFEGNL AISVKIVGDG TRYIVETNEL IDILAPLGNP FMPGEPERAR ESNGVVVVAP
SCFAEGYFIS QKFNVPLYVT SKTPFSEKFV EKFRDKNMEF IVGDSEFLGL TERLNDSDFD
WIFVSGSKNM EKIAVKNLYK KIVYISLNEY MGCGIGACKS CAVESKYGIK HVCTDGPVFR
GDEVCL
|
|---|
| |