Gene Fnod_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0407 
Symbol 
ID5452079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp442906 
End bp445338 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content36% 
IMG OID640874156 
ProductATP-dependent protease La 
Protein accessionYP_001409929 
Protein GI154249104 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAAATA AGAATGATAA TAAAGGGAAA TATTCAAGGC TTGAAAAAGA AGCAAAAAAA 
GCAAGGGAAG AAAAAATCTC TATCCCTAAC GTTTTGCCAG CAATAGCAAT GAGAAGTAAT
ATGGTTATTT TTCCAAATAC AGTTGTACCA TTTTACGTTG GACGTGAAAT TTCCTTAATG
GCTTTAGAGG AAGCCATGGA AAAGACTAAT CAAATTGTTT TTGTCGTTAA CCAAAAAGAT
CCTGCCGTTG AAACTCCCAC AGAAAAGGAT TTGTATAAAG TAGGTACAAT AGTTAGAATA
ATACAAGTTG GAAAGTTACC AGATGAAACA TTTAAAGTGC TTGTGGAAGG TATTGCACGT
GCGAAATGGA TAAAGAATGT TGGAGAAAAA TTCTTTAAAT TCGAAATAGA GATTCTACGC
ACGCGTTATG GTAAATCAAA GAGACTGATT GCTTTAATGA GAATGGTAAA AGAAGAACTC
CACAAGTACG TGCAATATTC AAGAAAGATT CCTCCAGAAA CGCTAATGTT ACTTGAAGAT
GTTGATAACC CAGATGTCTT CGCTGATATA GCAGCTTCCT TATGCCCTGG AAATATAGAA
GAAAAACAGC AATTACTTGA GATAGTGCAC CCAGCTAATA GGCTTGAGAG GATTTTAGAC
ATACTTGCAA GAGAAACTGA ATTACTTGAG ATTGAACAGC AGCTTGATCA AAAAGTAAAA
GAAAGAATCG AAAAGTCACA ACGTGAATAT TATCTTAGAG AAAAGTTGAG AGTAATCCGA
GATGAACTTG GTGGAGAAGA AGATATTGAG ATAAAAGAAT TAAAGGAGAA GATTGAAAAT
AATAATTATC CTGAATTTGT TAAAGAAAAA GCGAGAGCTG AAATTAACAG GCTTGAAAAA
ATGTCACCAT ACGCGCCAGA AGCGACTGTT GTAAGAACTT ACTTAGATTG GATATTGAAC
TTACCTTGGC ACGAAAAAAC CGATGATACC GATGATATAA ATTTTGCGGA AAAAGTATTA
AACGAAGACC ATTACGGTTT AGATGAACCA AAAAGGAGAA TTTTAGAGTA TCTTGCAACT
AGAAAAGTGT CTCAAAAAGC CAAAGCTCCA ATTATTTGTT TTGTTGGTCC TCCTGGTGTT
GGTAAAACAT CACTTGCGAA ATCTATTGCT AGAGCAATGA ATAGAAAATT TGGCCGAATG
TCATTGGGCG GACTGAGAGA TGAAGCTGAG ATAAGAGGAC ACAGACGTAC TTATGTTGGA
GCTATGCCTG GTAGAATTAT GCAACTCATA AGAAAACTCG GTGTTAAAAA TCCAGTGATA
CTATTAGACG AGATAGATAA GATGGGCATA AGCTTCCAAG GAGATCCGGC ATCTGCGCTT
TTGGAAGTTC TAGATCCAGA ACAAAATAAA GAGTTCGTTG ACCATTACAT TGAACTACCT
TACGACCTTT CCGAGGTTTT ATTCGTTACG ACGGCGAATG TACTCTATAC GATACCACCA
GCGTTGCGCG ATAGAATGGA AGTTATAGAA ATATCGAGTT ATACAGATGT TGAGAAATTC
TATATAGCGA AAAATTACAT AATTCCTAAA ATTGAATCTG AATTCGTTGA AAAAGCCGAT
GAAATTTTCT CATTTAAAGA TACAGCTATC AAGAAAATAA TAAACGAGTA CACTTTGGAA
CCTGGTGTGA GAGAACTCGA AAGGGAGATA AGGAGTGTTG TTAGAAAAGC TACGTTAGAT
GCTATAAAAA CAGGTAAAAA AATTGTGATT AGCCCAGAAA AAGTTACTGA ATACTTAGGA
CCAAGCAAAA TTAAAGATGA AGACAAATTG GAAAAACCAA TGATTGGTGT TACAACAGGG
CTCGCTTGGA CACCAAATGG AGGTACTACA CTTTATATAG AATCCACGTT GATACCCGGT
AACGGCGGAC TTATAATAAC CGGTCAACTT GGCGATGTGA TGAAAGAATC CGTGCGTATT
GCATTGAGTC TTGCACGCAA AATAGTTGGC GACGAATATG CTGAAAAGTT CACTAAGAAC
GATATCCATG TACACGTACC TGAAGGAGCT GTACCAAAAG ACGGTCCTAG CGCTGGTGTA
ACTATAACAA CGGCTTTAGT ATCTGTTGTT AAAAATATAC CTGTGAGAAA TGATATAGCT
ATGACTGGAG AAATAACACT TAGGGGAAGA GTGCTACCTG TAGGCGGAAT AAAAGAAAAA
GTTATGGCAG CATATAGAAA AGGTATATAC CATGTTATAC TCCCAAAGAA AAATGAAGTT
GATATTGAAA AAGTTCCTGA AGTGGTTAGA ACAAAGATGA AATTTACATT TGTCGAAACG
ATAGAAGAAG TATTGGAGGT GGCACTTAAT GAAGATAATT CCAAAGAAAG TAGAAAAGGT
AGAACTCGTA AAGGTAATAG CAACACTAAA TGA
 
Protein sequence
MPNKNDNKGK YSRLEKEAKK AREEKISIPN VLPAIAMRSN MVIFPNTVVP FYVGREISLM 
ALEEAMEKTN QIVFVVNQKD PAVETPTEKD LYKVGTIVRI IQVGKLPDET FKVLVEGIAR
AKWIKNVGEK FFKFEIEILR TRYGKSKRLI ALMRMVKEEL HKYVQYSRKI PPETLMLLED
VDNPDVFADI AASLCPGNIE EKQQLLEIVH PANRLERILD ILARETELLE IEQQLDQKVK
ERIEKSQREY YLREKLRVIR DELGGEEDIE IKELKEKIEN NNYPEFVKEK ARAEINRLEK
MSPYAPEATV VRTYLDWILN LPWHEKTDDT DDINFAEKVL NEDHYGLDEP KRRILEYLAT
RKVSQKAKAP IICFVGPPGV GKTSLAKSIA RAMNRKFGRM SLGGLRDEAE IRGHRRTYVG
AMPGRIMQLI RKLGVKNPVI LLDEIDKMGI SFQGDPASAL LEVLDPEQNK EFVDHYIELP
YDLSEVLFVT TANVLYTIPP ALRDRMEVIE ISSYTDVEKF YIAKNYIIPK IESEFVEKAD
EIFSFKDTAI KKIINEYTLE PGVRELEREI RSVVRKATLD AIKTGKKIVI SPEKVTEYLG
PSKIKDEDKL EKPMIGVTTG LAWTPNGGTT LYIESTLIPG NGGLIITGQL GDVMKESVRI
ALSLARKIVG DEYAEKFTKN DIHVHVPEGA VPKDGPSAGV TITTALVSVV KNIPVRNDIA
MTGEITLRGR VLPVGGIKEK VMAAYRKGIY HVILPKKNEV DIEKVPEVVR TKMKFTFVET
IEEVLEVALN EDNSKESRKG RTRKGNSNTK