Gene Fnod_0171 details

Gene Information

• Locus tag: Fnod_0171
• ID: 5452635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 174962
• End bp: 175654
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640873918
• Product: glutamine amidotransferase-like protein
• Protein accession: YP_001409695
• Protein GI: 154248870
• COG category: [R] General function prediction only
• COG ID: [COG0121] Predicted glutamine amidotransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00264215
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTAGAA TGGCTGGTTT TAGTTTTGAT GATAATCAAA ATATATCTGA AATTTTTGAG 
TTTGTCAAAT CTATGGCACT TAACGGTATG GAGGCACCAC ATAACGATGG TTGGGGATGT 
TTCTGTAAAA ATGATGTTAA TCATATTTTG TACAAGTCAC TCAGACCAAT ATACGAAGAT 
TCATATAACA TAAATAAAAT AACTGAAGAA AAATTTAAAT TAGGTTTAAT TCACGCAAGG 
CTTGCTTCGA AAGGTCTTCC AAAGACAACA TTGCAGCTTC ATCCATTTTA CATAAACGGG 
AGATATTTTG CGCACAACGG CACAATAAAA AGCGCAAGAA GAGAAAATAT TTACGAGAGT 
GATACTTACG AATATTTTGA AAATATCGTC AATTTTAATT CGATTGGTCA ACTTGTTCAG 
AATATCTTGA AATATTCTAA AATAAATGAG TTTAGTGGTA TGAATTTTAT TATGGTTGAT 
GAAAAAGAAA ACGCTTTATA CGTATGTTGT CTTTACACAG ACACATCAAG AAATAAAGAG 
TATTTTACGT TGCACTATTA CTATAACAAG TCTGATAAGA AGTTCATCGT TTATTCAGAA 
AAGTTCTCTG ATGAATTCCA ACCAATGAAA AATGGTGAAA TAATTAAGGT CATCGATGGT 
ATCATAGTGG AAAAGTTTTT TGTTAATATT TAA 

 

Protein sequence

MCRMAGFSFD DNQNISEIFE FVKSMALNGM EAPHNDGWGC FCKNDVNHIL YKSLRPIYED 
SYNINKITEE KFKLGLIHAR LASKGLPKTT LQLHPFYING RYFAHNGTIK SARRENIYES 
DTYEYFENIV NFNSIGQLVQ NILKYSKINE FSGMNFIMVD EKENALYVCC LYTDTSRNKE 
YFTLHYYYNK SDKKFIVYSE KFSDEFQPMK NGEIIKVIDG IIVEKFFVNI