Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4823 |
Symbol | |
ID | 5089451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5840725 |
End bp | 5841603 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644744246 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001197141 |
Protein GI | 146302550 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.802517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACAG ATATTCTAGA ATTACATGAT TGTATTGTTT TAATCGAGCA TTCGAATACC ACAAAAACAA TTGTTCAAAA ATGTGAAATC GACGGCGATG CGCTGGGTTT TGCCTTTTAT GGTTCGGGAA ATGTTGAGTT AGAAATTAAA CACAATAAAC AGACTAAATA TTTGGTAAAT ACAACAGGGC TGGCAATTTG TTTTTTTGGA AACCAAAAAG TCGAATTCTC ACATAAAATT GAACCCGACA GACCTTTACA GTCCATCAGT ATTTTTACCA AACTGAAAAA TCTTAATTCA TTACCGCAAG CCGAAAAAGA GATTTTCGAA AATCATTTAC CACAATTATT AAACCCAAAA GAACATTTTG TAAAAGGTCC GTCGTTTTAC ATGACACTCG AAATGCAGCT GGCGGTTCAA AAAATCTTTA ATACAACCTA CACCGGAAAT ACACGTTTGT TATTTTTAAA AAGTCAGGTC AATGAACTTC TGGCACATTT TTATGCGCTT TTAGCTTCTG AGAAAAAACT GGATTTGTCT GAAACAGATA AAAACAAACT TTTTCAGGCC AAAGAAATTG TTACCATCAA TTATTCGACA CCGCCGTCTA TAACGCAGTT GTCACAAATG GTTGGGCTCA ACAGCAATAA ATTAAAAAAG AATTTCAAGG AACTTTTTGG GATTCCGGTT TTTAAATTTG TTCAGGAAGA ACGATTAAAC AAGGCGTATG AACTACTCCG CGAAAGCGAA AAAACAGTTC AGGAATCAGC CTGGGAAGTG GGTTACGAAA GTTTGAGTTC GTTTTCGAAT GCTTTTCATA AAAAATTTGG CATGCGTCCC AACGATGTAA AACAGCAGTT CTTTTCAAAC AAATCATAA
|
Protein sequence | MTTDILELHD CIVLIEHSNT TKTIVQKCEI DGDALGFAFY GSGNVELEIK HNKQTKYLVN TTGLAICFFG NQKVEFSHKI EPDRPLQSIS IFTKLKNLNS LPQAEKEIFE NHLPQLLNPK EHFVKGPSFY MTLEMQLAVQ KIFNTTYTGN TRLLFLKSQV NELLAHFYAL LASEKKLDLS ETDKNKLFQA KEIVTINYST PPSITQLSQM VGLNSNKLKK NFKELFGIPV FKFVQEERLN KAYELLRESE KTVQESAWEV GYESLSSFSN AFHKKFGMRP NDVKQQFFSN KS
|
| |