Gene Fjoh_4823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4823 
Symbol 
ID5089451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5840725 
End bp5841603 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content35% 
IMG OID644744246 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001197141 
Protein GI146302550 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.802517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAG ATATTCTAGA ATTACATGAT TGTATTGTTT TAATCGAGCA TTCGAATACC 
ACAAAAACAA TTGTTCAAAA ATGTGAAATC GACGGCGATG CGCTGGGTTT TGCCTTTTAT
GGTTCGGGAA ATGTTGAGTT AGAAATTAAA CACAATAAAC AGACTAAATA TTTGGTAAAT
ACAACAGGGC TGGCAATTTG TTTTTTTGGA AACCAAAAAG TCGAATTCTC ACATAAAATT
GAACCCGACA GACCTTTACA GTCCATCAGT ATTTTTACCA AACTGAAAAA TCTTAATTCA
TTACCGCAAG CCGAAAAAGA GATTTTCGAA AATCATTTAC CACAATTATT AAACCCAAAA
GAACATTTTG TAAAAGGTCC GTCGTTTTAC ATGACACTCG AAATGCAGCT GGCGGTTCAA
AAAATCTTTA ATACAACCTA CACCGGAAAT ACACGTTTGT TATTTTTAAA AAGTCAGGTC
AATGAACTTC TGGCACATTT TTATGCGCTT TTAGCTTCTG AGAAAAAACT GGATTTGTCT
GAAACAGATA AAAACAAACT TTTTCAGGCC AAAGAAATTG TTACCATCAA TTATTCGACA
CCGCCGTCTA TAACGCAGTT GTCACAAATG GTTGGGCTCA ACAGCAATAA ATTAAAAAAG
AATTTCAAGG AACTTTTTGG GATTCCGGTT TTTAAATTTG TTCAGGAAGA ACGATTAAAC
AAGGCGTATG AACTACTCCG CGAAAGCGAA AAAACAGTTC AGGAATCAGC CTGGGAAGTG
GGTTACGAAA GTTTGAGTTC GTTTTCGAAT GCTTTTCATA AAAAATTTGG CATGCGTCCC
AACGATGTAA AACAGCAGTT CTTTTCAAAC AAATCATAA
 
Protein sequence
MTTDILELHD CIVLIEHSNT TKTIVQKCEI DGDALGFAFY GSGNVELEIK HNKQTKYLVN 
TTGLAICFFG NQKVEFSHKI EPDRPLQSIS IFTKLKNLNS LPQAEKEIFE NHLPQLLNPK
EHFVKGPSFY MTLEMQLAVQ KIFNTTYTGN TRLLFLKSQV NELLAHFYAL LASEKKLDLS
ETDKNKLFQA KEIVTINYST PPSITQLSQM VGLNSNKLKK NFKELFGIPV FKFVQEERLN
KAYELLRESE KTVQESAWEV GYESLSSFSN AFHKKFGMRP NDVKQQFFSN KS