Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4767 |
Symbol | |
ID | 5090094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5763218 |
End bp | 5764159 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644744190 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001197085 |
Protein GI | 146302494 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGATAA CTCAATTACA ATATGTATTA GCTGTTGCAG AGCATAAAAA CTTTACACTT GCCGCCGAAA AGTGTTTCGT AACACAGCCA ACATTAAGTA TGCAGATTCA AAAAATTGAA GAAGAACTTA ATATTTTAAT TTTCGACAGA AGCAAAAAAC CAATTCAGCT TACAGACATT GGACAAAAAA TTGTAAATCA GGCTAAAAAT ATTGTAAACG AAGCTGACCG AATCAAAGAT ATTGTAGAAC AGCAGAAAGG TTTTATTGGC GGAGAATTTC GATTAGGAAT TATACCTACT ATTATGCCAA CCCTTTTACC AATGTTTTTA AATAATTTTA TTAAAAAATA TCCAAAAGTT AAGCTTTTAA TTGAAGAGCT TAATACAGAT GAAATTATAG TAAAATTAAA AAACGGTCAT CTGGACGCTG CCATTGCCGC CACGCCTCTT GAAGATGAAA AGATAAAAGA AATTGTTTTG TATTTTGAGC CTTTTGTGGC TTATATTCCG GAACATCATC ATAGTTTTCA AAAAGAAGAA ATTGAAGTTG CCGATTTAAA CATTAATGAA ATCCTGCTTT TACAAGACGG ACATTGTTTT AGAGACGGAA TTTTAAATTT ATGCAAAAAC GGCACTGATG TCGACCAAAA CAATTTTCAG ATTCAAAGCG GCAGTTTTGA AACTTTAATA AAATTAGCCG ATGAAGGTTT GGGCACAACG TTACTTCCGT ACTTGCACAC CTTAGACTTA AAAGAATCCG ATAAACTAAA ACTACGAAAC TTTAAAGAAC CAAAACCTGC CCGAGAGGTA AGTTTAATTT ACCCAAAGAG CGAATTAAAA ATGCAGATCA TTGATGCCAT TCGATCTACA ATTGCCGGTG TTGTAAAAGG CGCTATTGTT TTTCAAAATG TGCAGATCAT CAGCCCGCTG CAAAAAAAGT AA
|
Protein sequence | MTITQLQYVL AVAEHKNFTL AAEKCFVTQP TLSMQIQKIE EELNILIFDR SKKPIQLTDI GQKIVNQAKN IVNEADRIKD IVEQQKGFIG GEFRLGIIPT IMPTLLPMFL NNFIKKYPKV KLLIEELNTD EIIVKLKNGH LDAAIAATPL EDEKIKEIVL YFEPFVAYIP EHHHSFQKEE IEVADLNINE ILLLQDGHCF RDGILNLCKN GTDVDQNNFQ IQSGSFETLI KLADEGLGTT LLPYLHTLDL KESDKLKLRN FKEPKPAREV SLIYPKSELK MQIIDAIRST IAGVVKGAIV FQNVQIISPL QKK
|
| |