Gene Fjoh_4513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4513 
Symbol 
ID5092586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5453881 
End bp5454615 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID644743929 
Product3-deoxy-D-manno-octulosonate cytidylyltransferase 
Protein accessionYP_001196831 
Protein GI146302240 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA TAGCGGTAAT ACCGGCACGA TATGCCTCAA CACGATTTCC TGCAAAATTG 
ATGCAGGATT TGGGAGGTAA AACAGTAATT CTAAGAACGT ATGAAGCTGC AGTTTCAACA
AAATTATTTG ATGATGTTTT TGTTGTAACC GATTCTGATT TGATTTTTGA TGAAATTGTT
TCTAATGGTG GAAAAGCCAT TATGAGCATC AAAGAACACG AATCTGGAAG TGATCGAATT
GCAGAGGCTG TTGCAAATCT TGATGTTGAT ATTGTGGTAA ATGTACAAGG AGACGAGCCT
TTTACAGAAG CGGGGCCTTT AGAACAGGTT TTATCTGTTT TTAAAAATGA TCCAGATAAA
AAGATTGATT TGGCTTCATT AATGCGTGAA ATTACAAACG AAGACGAAAT CAACAATCCA
AATAATGTGA AGGTTGTGGT AGATCAATCG CAGTTTGCGT TGTATTTTTC AAGATCAGTA
ATTCCGTATC CAAGAGAGAA AGATGCCGGA GTTCGTTATT TTCAGCATAT CGGAATTTAC
GCTTTTAGGA AACAGGCTTT GTTAGACTTT TACAGTCTTC CAATGAAATC TTTAGAAGCT
TCAGAGAAAT TAGAACAGCT GCGTTATTTA GAGTTTGGAA AACGTATTAA AATGGTTGAA
ACAACTCATG TTGGAATTGG AATTGATACT GCTGAGGATT TAGAAAGAGC CAGAGCGATG
CTTAGAGATA TTTAA
 
Protein sequence
MKIIAVIPAR YASTRFPAKL MQDLGGKTVI LRTYEAAVST KLFDDVFVVT DSDLIFDEIV 
SNGGKAIMSI KEHESGSDRI AEAVANLDVD IVVNVQGDEP FTEAGPLEQV LSVFKNDPDK
KIDLASLMRE ITNEDEINNP NNVKVVVDQS QFALYFSRSV IPYPREKDAG VRYFQHIGIY
AFRKQALLDF YSLPMKSLEA SEKLEQLRYL EFGKRIKMVE TTHVGIGIDT AEDLERARAM
LRDI