Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4513 |
Symbol | |
ID | 5092586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5453881 |
End bp | 5454615 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644743929 |
Product | 3-deoxy-D-manno-octulosonate cytidylyltransferase |
Protein accession | YP_001196831 |
Protein GI | 146302240 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAA TAGCGGTAAT ACCGGCACGA TATGCCTCAA CACGATTTCC TGCAAAATTG ATGCAGGATT TGGGAGGTAA AACAGTAATT CTAAGAACGT ATGAAGCTGC AGTTTCAACA AAATTATTTG ATGATGTTTT TGTTGTAACC GATTCTGATT TGATTTTTGA TGAAATTGTT TCTAATGGTG GAAAAGCCAT TATGAGCATC AAAGAACACG AATCTGGAAG TGATCGAATT GCAGAGGCTG TTGCAAATCT TGATGTTGAT ATTGTGGTAA ATGTACAAGG AGACGAGCCT TTTACAGAAG CGGGGCCTTT AGAACAGGTT TTATCTGTTT TTAAAAATGA TCCAGATAAA AAGATTGATT TGGCTTCATT AATGCGTGAA ATTACAAACG AAGACGAAAT CAACAATCCA AATAATGTGA AGGTTGTGGT AGATCAATCG CAGTTTGCGT TGTATTTTTC AAGATCAGTA ATTCCGTATC CAAGAGAGAA AGATGCCGGA GTTCGTTATT TTCAGCATAT CGGAATTTAC GCTTTTAGGA AACAGGCTTT GTTAGACTTT TACAGTCTTC CAATGAAATC TTTAGAAGCT TCAGAGAAAT TAGAACAGCT GCGTTATTTA GAGTTTGGAA AACGTATTAA AATGGTTGAA ACAACTCATG TTGGAATTGG AATTGATACT GCTGAGGATT TAGAAAGAGC CAGAGCGATG CTTAGAGATA TTTAA
|
Protein sequence | MKIIAVIPAR YASTRFPAKL MQDLGGKTVI LRTYEAAVST KLFDDVFVVT DSDLIFDEIV SNGGKAIMSI KEHESGSDRI AEAVANLDVD IVVNVQGDEP FTEAGPLEQV LSVFKNDPDK KIDLASLMRE ITNEDEINNP NNVKVVVDQS QFALYFSRSV IPYPREKDAG VRYFQHIGIY AFRKQALLDF YSLPMKSLEA SEKLEQLRYL EFGKRIKMVE TTHVGIGIDT AEDLERARAM LRDI
|
| |