| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4512 |
|---|
| Symbol | |
|---|
| ID | 5092585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5451323 |
|---|
| End bp | 5453737 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644743928 |
|---|
| Product | transketolase domain-containing protein |
|---|
| Protein accession | YP_001196830 |
|---|
| Protein GI | 146302239 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.810203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACAG AAAAAAGCAA TACTACTTTA ACCTTTGAAG ATTTCAGAAC TGAGGTCCTG
AATGATTACA GAATTGCCGT AACAAGCCGT GAATGCAGCT TATTAGGCCG TAAAGAGGTA
TTAACAGGAA AAGCTAAATT CGGGATTTTT GGAGACGGAA AAGAAGTGCC GCAGCTTGCT
ATGGCAAAAG CCTTTAAAGA TGGGGATTTT CGTTCTGGAT ATTATCGTGA TCAAACTTTT
ATGATGGCGA TTGGCGAATT AAACGCAAAA CAATTTTTTG CAGGTTTATA CGGCCACACC
GATTTAAATT ATGATCCAAT GTCTGCCGGA AGGCAAATGG GCGGACACTT TGTAACGCAC
AGTTTAAATG AAGACGGATC CTGGAAAGAT TTAACAAAAC AAAAAAATTC AAGTTCAGAT
ATATCACCTA CTGCAGGACA AATGCCAAGA TTATTGGGAT TAGCTCAGGC ATCAAAGATT
TACAGAAATG TTGACGGAAT AAAAATCAAA GACAAATTTA CTGTAAACGG AAATGAAGTT
GCGTGGGGAA CAATAGGAAA TGCAAGTACT TCTGAAGGTT TATTTTTTGA AACTATAAAT
GCTGCCGGAG TTTTACAAGT TCCGATGGTA ATGAGCGTTT GGGATGATGA ATACGGAATT
TCGGTTCATG CAAAACACCA GACAACAAAA GAAAATATTT CTGAAATACT TAAAGGTTAT
CAGCGTGATG AAGATTCTAA AGGATATGAA ATCTTTAGAG TAAAAGGATG GGATTATGCC
GAGTTGGTTT CGACTTACGA AAGAGCCGGC GCCGTTGCAC GCGAAGAACA TATTCCAATT
TTAATTCACG TAAACGAATT GACACAGCCG CAGGGCCACT CTACTTCTGG TTCTCACGAA
CGTTACAAAA GTGCTGAAAG ACTTGCCTGG GAAAGAGATT TTGATTGTAT CCGTCAAATG
CGTTTATGGA TGATTGCCAT CAATATTGCC TCTCCGGAAG AATTAGCAGA ACTTGATGCT
GAATTGAAAA AAGAAGTTCT TGAAGCTAAA AAAGAAGCCT GGAACGATTT TATTAATCCA
ATTATAGAAG AACAAAATAA TCTTTTAGAT TTATTGGAGC AGATTGCTGA AGCCAGCATC
AACCATAAAG AAAGAATTAG AAAATATATT TCAGAATTAA AAGCCATTAA AGCGCCTTTA
AAGAAAGAAT TACTGGTTTA TGCCCGTAAA ATTCTTCGCT TTATAGAAGT TCCAAACAGC
AAAGTTATTC TGTCAAACTG GATTACGAAT TTTATTGAAG CAACTCAGGA AAAATTCAGC
AGCAACCTGC ATTCAGAATC AGCACAAAAT GTATTTTCTG TACAAAAAGT GCTTCCTAAA
TATGCTGAAA ATGCAAAACC GGATTTAGAC GGAAGAATGG TAATTCGTGA TAACTTTGAT
GCTTTATTCA ATAAATATCC TGAATTATTG ATTTTTGGTG AAGATGTTGG AAACATTGGC
GACGTAAATC AAGGACTTGA AGGCATGCAG GAAAAATACG GAGAACTTCG TGTTGCCGAT
GTCGGAATTC GTGAAGCAAC CATTATTGGT CAGGGAATTG GAATGGCTTT GAGAGGTCTG
CGTCCAATTG CTGAAATCCA GTATTTAGAT TATTTATTGT ACGCGATTCA AATCATGAGT
GATGATTTGG CTACTTTACA ATACAGAACA GTTGGAAAAC AAAAAGCACC ATTAATTATC
AGAACCCGCG GACACCGTTT AGAAGGTATC TGGCATTCTG GTTCTCCAAT GGGAATGATT
ATAAACGCTA TCCGAGGAAT TCACGTTTTG GTTCCTAGAG ATATGACACA AGCAGCAGGA
TTTTACAATA CTCTTTTAGA GTGTGATGAA CCTGCTTTAG TAATTGAATG TTTAAATGGT
TACCGTTTAA AAGAAAAAAC ACCTTTAAAT TTTGGTGAAT TCAAAACGCC GATTGGTGTG
GTTGAAACTT TAAAAGAAGG TGCAGATATT ACTTTAGTTT CTTACGGATC GACTTTAAGA
CTCGTTCAAC AGGCAGCAAC AGAGTTATTA GATTTAGGAA TTGACTGTGA AATTATTGAT
ATTCAGTCTT TACTTCCGTT TGACGTTAAT AAAGATATTG TAAAAAGTAT CGCAAAAACA
AATCGTCTTT TAGTAATCGA CGAAGATGTT CCGGGCGGTG CTTCAGCATA CATATTACAA
CAGATTTTAG AAGAACAAGA TGCTTACAAA TATCTTGACA GCAAACCGCA GACTCTTGCT
GCAAAAGCCC ACAGACCTGC TTATGGAACT GACGGCGATT ATTTCTCTAA ACCTTCTGCC
GAAGATATTT TTGAGAAAGT ATACAGCATG ATGAACGAAG TTAATCCTTC TAAATTTCCA
AATTTATACC AGTAA
|
|---|
| Protein sequence | MITEKSNTTL TFEDFRTEVL NDYRIAVTSR ECSLLGRKEV LTGKAKFGIF GDGKEVPQLA
MAKAFKDGDF RSGYYRDQTF MMAIGELNAK QFFAGLYGHT DLNYDPMSAG RQMGGHFVTH
SLNEDGSWKD LTKQKNSSSD ISPTAGQMPR LLGLAQASKI YRNVDGIKIK DKFTVNGNEV
AWGTIGNAST SEGLFFETIN AAGVLQVPMV MSVWDDEYGI SVHAKHQTTK ENISEILKGY
QRDEDSKGYE IFRVKGWDYA ELVSTYERAG AVAREEHIPI LIHVNELTQP QGHSTSGSHE
RYKSAERLAW ERDFDCIRQM RLWMIAINIA SPEELAELDA ELKKEVLEAK KEAWNDFINP
IIEEQNNLLD LLEQIAEASI NHKERIRKYI SELKAIKAPL KKELLVYARK ILRFIEVPNS
KVILSNWITN FIEATQEKFS SNLHSESAQN VFSVQKVLPK YAENAKPDLD GRMVIRDNFD
ALFNKYPELL IFGEDVGNIG DVNQGLEGMQ EKYGELRVAD VGIREATIIG QGIGMALRGL
RPIAEIQYLD YLLYAIQIMS DDLATLQYRT VGKQKAPLII RTRGHRLEGI WHSGSPMGMI
INAIRGIHVL VPRDMTQAAG FYNTLLECDE PALVIECLNG YRLKEKTPLN FGEFKTPIGV
VETLKEGADI TLVSYGSTLR LVQQAATELL DLGIDCEIID IQSLLPFDVN KDIVKSIAKT
NRLLVIDEDV PGGASAYILQ QILEEQDAYK YLDSKPQTLA AKAHRPAYGT DGDYFSKPSA
EDIFEKVYSM MNEVNPSKFP NLYQ
|
|---|
| |